Index

Symbols

--debug-plugins command line option

--list-plugins category command line option

A

About (class in openalea.oalab.about) about() (openalea.visualea.mainwindow.MainWindow method) AboutPage (class in openalea.oalab.about) abspath() (core.path.path method) AbstractControlWidget (class in openalea.oalab.control.widget) AbstractDeserializer (class in core.serialization) AbstractEvaluation (class in core.algo.dataflow_evaluation) AbstractFactory (class in core.factory) (class in core.node) AbstractLoader (class in core.serialization) AbstractMplWidget (class in openalea.oalab.plot2d.mplwidget) AbstractNode (class in core.node) AbstractPackageReader (class in core.package) (class in openalea.core.package) AbstractPainter (class in openalea.oalab.painter) AbstractParadigmPlugin (class in openalea.oalab.plugin.builtin.oalab.paradigm) AbstractPort (class in core.node) AbstractQtControlWidget (class in openalea.oalab.control.widget) AbstractSaver (class in core.serialization) AbstractWorld (class in openalea.oalab_wralea.oalabnode) access() (core.path.path method) AccuFloat (class in core.system.systemnodes) AccuList (class in core.system.systemnodes) action() (openalea.oalab.paradigm.creator.ParadigmCreator method) actions() (in module openalea.oalab.paradigm.visualea) (openalea.oalab.control.qcontainer.QControlContainer method) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) (openalea.oalab.paradigm.container.ModelEditorApplet method) (openalea.oalab.paradigm.creator.ParadigmCreator method) (openalea.oalab.plugin.applet.IApplet method) (openalea.oalab.plugin.oalab.paradigm.IParadigmApplet method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) activate() (in module openalea.oalab.plot2d.figurewidget) (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) activate_in_pyplot() (in module openalea.oalab.plot2d) active_project() (in module core.service.project) actor() (core.dataflow.DataFlow method) adapt_interpreter() (in module core.interpreter) adapt_widget() (in module openalea.oalab.paradigm.visualea) add() (core.control.manager.ControlContainer method) (core.manager.GenericManager method) (core.pkgmanager.Logger method) (core.project.project.Project method) (core.scene.vplscene.VPLScene method) (core.world.world.World method) (openalea.core.pkgmanager.Logger method) add_actor() (core.dataflow.DataFlow method) add_child() (core.graph.interface.treeconcept.MutableTreeConcept method) add_child_tree() (core.graph.interface.treeconcept.EditableTreeConcept method) add_composite_node() (openalea.visualea.node_treeview.NodeFactoryView method) add_control() (core.control.manager.ControlContainer method) (openalea.oalab.control.model_view.ControlModel method) add_data() (core.datapool.DataPool method) (openalea.visualea.node_treeview.NodeFactoryView method) add_data_file() (core.package.UserPackage method) (openalea.core.package.UserPackage method) add_default_tab() (openalea.oalab.paradigm.container.ParadigmContainer method) add_docstring() (in module core.external) add_drag_format() (in module openalea.oalab.service.drag_and_drop) (openalea.oalab.drag_and_drop.DragHandler method) add_drop_callback() (in module openalea.oalab.service.drag_and_drop) (openalea.oalab.drag_and_drop.DropHandler method) add_edge() (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableEdgeGraph method) (core.graph.interface.graphconcept.MutableEdgeGraphConcept method) (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) add_edge_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) add_factory() (core.package.Package method) (core.package.UserPackage method) (in module core.factory_parser) (openalea.core.package.Package method) (openalea.core.package.UserPackage method) add_graph_view() (core.session.Session method) add_handler() (core.logger.LoggerOffice method) add_in_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) add_input() (core.node.Node method) add_item() (core.project.project.Project method) add_items() (core.manager.GenericManager method) add_last_open() (openalea.visualea.mainwindow.MainWindow method) add_logger() (core.logger.LoggerOffice method) add_metadata() (core.metadatadict.MetaDataDict method) add_name() (core.pkgmanager.PseudoGroup method) (openalea.core.pkgmanager.PseudoGroup method) add_new_file_actions() (openalea.oalab.project.projecteditor.ProjectEditorView method) add_node() (core.compositenode.CompositeNode method)

add_option() (core.settings.Settings method) add_out_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) add_output() (core.node.Node method) add_package() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) add_path_to_search_item() (openalea.oalab.project.explorer.ProjectExplorer method) add_pkgdir() (openalea.visualea.mainwindow.MainWindow method) add_point() (image.gui.point_selection.PointSelection method) add_project_directory() (in module core.service.project) add_python_node() (openalea.visualea.node_treeview.NodeFactoryView method) add_rgb_point() (openalea.oalab.colormap.colormap_utils.Colormap method) add_scale() (core.graph.interface.latticeconcept.MutableScaleLattice method) add_section_update_handler() (core.settings.Settings method) add_tab_canvas() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) add_task() (core.threadmanager.ThreadManager method) add_to_history() (openalea.oalab.shell.shellwidget.ShellWidget method) add_to_view() (openalea.grapheditor.interfaces.IGraphViewElement method) add_vertex() (core.dataflow.DataFlow method) (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableVertexGraph method) (core.graph.interface.graphconcept.MutableVertexGraphConcept method) (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) add_vertex_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) add_welcome_tab() (openalea.oalab.paradigm.container.ParadigmContainer method) add_words() (openalea.oalab.editor.completion.DictionaryCompleter method) add_workspace() (core.session.Session method) add_wralea_path() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) addBtnByAction() (openalea.oalab.gui.menu.PanedMenu method) addToolBar() (openalea.oalab.plot2d.mplwidget.CanvasWidget method) alias (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) Alias() (in module core.node) all (core.interface.IInterfaceMetaClass attribute) angles2transfo() (in module image.registration.registration) animate() (core.model.IModel method) (core.model.Model method) (openalea.core.model.IModel method) (openalea.core.model.Model method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method) AnimatorNode (class in image_wralea.gui.animator_widget) AnimatorWidget (class in image_wralea.gui.animator_widget) Annotation (class in core.node) annotation (core.funcsigs.Parameter attribute) AnnotationNode (class in core.system.systemnodes) append_frame() (image.gui.animator.FrameAnimator method) Applet (class in openalea.oalab.service.applet) applet() (openalea.oalab.paradigm.creator.ParadigmCreator method) AppletPlugin (class in openalea.oalab.plugin.builtin.applet) applets (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) apply() (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) apply_all() (openalea.oalab.paradigm.container.ParadigmContainer method) apply_mask() (in module image.algo.basic) apply_new_src() (core.node.NodeFactory method) apply_palette() (in module image_wralea.palette) args (core.funcsigs.BoundArguments attribute) ast_parse() (in module openalea.oalab.model.parse) atime (core.path.path attribute) attribute() (core.world.world.WorldObject method) attributes (core.world.world.WorldObject attribute) authors (image.plugin.algo.IImageFilteringPlugin attribute) (openalea.oalab.plugin.builtin.applet.ContextualMenu attribute) (openalea.oalab.plugin.builtin.applet.ControlManager attribute) (openalea.oalab.plugin.builtin.applet.EditorManager attribute) (openalea.oalab.plugin.builtin.applet.FileBrowser attribute) (openalea.oalab.plugin.builtin.applet.HelpWidget attribute) (openalea.oalab.plugin.builtin.applet.HistoryWidget attribute) (openalea.oalab.plugin.builtin.applet.Logger attribute) (openalea.oalab.plugin.builtin.applet.MplFigureWidget attribute) (openalea.oalab.plugin.builtin.applet.MplTabWidget attribute) (openalea.oalab.plugin.builtin.applet.PkgManagerWidget attribute) (openalea.oalab.plugin.builtin.applet.ProjectManager attribute) (openalea.oalab.plugin.builtin.applet.ShellWidget attribute) (openalea.oalab.plugin.builtin.applet.SplitterApplet attribute) (openalea.oalab.plugin.builtin.applet.World attribute) (openalea.oalab.plugin.builtin.applet.WorldControl attribute) auto-apply mode, [1] auto-read mode, [1] auto_close() (openalea.oalab.paradigm.container.ParadigmContainer method) autoapply() (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.control.widget.AbstractQtControlWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) autoread() (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.plugin.oalab.control.IControlWidget method)

B

basename() (core.path.path method) BGEOMLoader (class in core.serialization) BGEOMSaver (class in core.serialization) BinaryLoader (class in core.serialization) BinarySaver (class in core.serialization) bind() (core.funcsigs.Signature method) bind_partial() (core.funcsigs.Signature method) black_and_white() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) block (core.node.Node attribute) block() (core.scene.vplscene.VPLScene method) body() (core.codegen.SourceGenerator method) body_or_else() (core.codegen.SourceGenerator method) border() (in module image.algo.basic) BoundArguments (class in core.funcsigs)

bounding_box() (in module image.algo.basic) BrutEvaluation (class in core.algo.dataflow_evaluation) build_graph() (core.vlab.VlabObject method) (core.vlab.VlabObject2 method) build_package() (core.package.PyPackageReader method) (core.package.PyPackageReaderWralea method) (core.vlab.VlabObject method) (openalea.core.package.PyPackageReader method) (openalea.core.package.PyPackageReaderWralea method) BuiltinControlCodec (class in openalea.oalab.mimedata.builtin) BuiltinControlCodecPlugin (class in openalea.oalab.plugin.builtin.oalab.mimedata) BuiltinDataCodec (class in openalea.oalab.mimedata.builtin) BuiltinDataCodecPlugin (class in openalea.oalab.plugin.builtin.oalab.mimedata) BuiltinModelCodec (class in openalea.oalab.mimedata.builtin) BuiltinModelCodecPlugin (class in openalea.oalab.plugin.builtin.oalab.mimedata) bw() (in module image.gui.palette) bwrainbow() (in module image.gui.palette) bytes() (core.path.path method)

C

camel_case_to_lower() (in module core.util) can_display_criterion() (in module core.plugin.formatting.text) can_insert_from_mime_data() (openalea.oalab.drag_and_drop.DropHandler method) CanvasWidget (class in openalea.oalab.plot2d.mplwidget) capacity() (core.graph.interface.port_graph.IPortGraph method) caption (core.node.Node attribute) cast_error() (in module core.customexception) category() (openalea.oalab.paradigm.creator.ParadigmInfoSelector method) (openalea.oalab.project.dialog.SelectCategory method) CategoryModel (class in openalea.visualea.node_treeview) change_axis() (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) change_object_attribute() (core.world.world.World method) change_palette() (image.gui.slide_viewer_widget.ImageStackViewerWidget method) changed() (core.control.manager.ControlContainer method) (core.data.DataNode method) check() (core.project.configobj.SimpleVal method) (openalea.grapheditor.interfaces.IInterfaceMetaClass method) (openalea.oalab.paradigm.creator.ParadigmInfoSelector method) check_code() (openalea.oalab.editor.text_editor.TextEditor method) check_events() (core.unittest_tools.TestCase method) check_mutually_exclusive() (in module openalea.oalab.paradigm.controller) checkerboard() (in module image.spatial_image) children() (core.graph.interface.treeconcept.RootedTreeConcept method) chmod() (core.path.path method) chown() (core.path.path method) chroot() (core.path.path method) classes (openalea.oalab.config.main.MainConfig attribute) clean_files() (core.data.DataFactory method) (core.node.AbstractFactory method) clear() (core.algo.dataflow_evaluation.DiscreteTimeEvaluation method) (core.algo.dataflow_evaluation.GeneratorEvaluation method) (core.algo.dataflow_evaluation.Provenance method) (core.compositenode.CompositeNodeFactory method) (core.control.manager.ControlContainer method) (core.dataflow.DataFlow method) (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableVertexGraph method) (core.graph.interface.graphconcept.MutableVertexGraphConcept method) (core.graph.property_graph.PropertyGraph method) (core.manager.GenericManager method) (core.pkgmanager.PackageManager method) (core.plugin.instance.PluginInstanceManager method) (core.project.manager.ProjectManager method) (core.scene.vplscene.VPLScene method) (core.script_library.ScriptLibrary method) (core.session.Session method) (core.threadmanager.ThreadManager method) (image.gui.id_generator.IdListGenerator method) (image.gui.id_generator.IdMaxGenerator method) (image.gui.id_generator.IdSetGenerator method) (openalea.core.pkgmanager.PackageManager method) (openalea.grapheditor.interfaces.IGraphListener method) (openalea.oalab.control.model_view.ControlModel method) (openalea.oalab.shell.shell.PyCutExt method) clear_controls() (in module core.service.control) clear_data_pool() (openalea.visualea.mainwindow.MainWindow method) clear_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableEdgeGraph method) (core.graph.interface.graphconcept.MutableEdgeGraphConcept method) (core.graph.property_graph.PropertyGraph method) clear_followers() (core.control.manager.ControlContainer method) clear_frames() (image.gui.animator.FrameAnimator method) (image_wralea.gui.animator_widget.AnimatorWidget method) clear_inputs() (core.node.Node method) clear_kwargs() (core.world.world.WorldObject method) clear_namespace() (core.project.manager.ProjectManager method) clear_outputs() (core.node.Node method) clear_python_console() (openalea.visualea.mainwindow.MainWindow method) clf() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) clone() (image.spatial_image.SpatialImage method) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) clone_action() (in module image.gui.animator) clone_from_package() (core.package.UserPackage method) (openalea.core.package.UserPackage method) close() (core.compositenode.CompositeNode method) (core.node.AbstractNode method) (core.project.manager.ProjectManager method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) close_all() (openalea.oalab.paradigm.container.ParadigmContainer method) close_current() (openalea.oalab.paradigm.container.ParadigmContainer method) close_data() (openalea.oalab.paradigm.container.ParadigmContainer method) close_figure() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) close_tab_workspace() (openalea.visualea.mainwindow.MainWindow method) close_window() (image.gui.animator.FrameAnimator method) close_workspace() (core.session.Session method) closeEvent() (openalea.oalab.pluginwidget.explorer.Preview method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) (openalea.visualea.mainwindow.MainWindow method) cmp_name() (in module core.pkgmanager) (in module openalea.core.pkgmanager) cmp_posx() (in module core.algo.dataflow_evaluation) cmp_priority() (in module core.algo.dataflow_evaluation) cn_deps() (in module core.pm_extend) cn_pkgs_deps() (in module core.pm_extend) coarser() (core.graph.interface.latticeconcept.ScaleLattice method) coarsest() (core.graph.interface.latticeconcept.ScaleLattice method) code (core.data.Data attribute) (core.model.Model attribute) (openalea.core.model.Model attribute) collapsed() (openalea.visualea.node_treeview.NodeFactoryTreeView method) color2grey() (in module image.algo.basic) color_line() (openalea.oalab.shell.shell.PyCutExt method) color_select() (in module image.algo.basic) Colormap (class in openalea.oalab.colormap.colormap_utils) colormap_from_file() (in module openalea.oalab.colormap.colormap_utils) ColormapWidgetSelector (class in openalea.oalab.control.selector) columnCount() (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) command line option --debug-plugins --list-plugins category CommandLineParser (class in openalea.oalab.cli.parser) comment() (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) compatible_mime() (openalea.oalab.mimedata.manager.MimeCodecManager method) complex() (core.graph.interface.latticeconcept.MultiscaleContainer method) component_labeling() (in module image.algo.morpho) components() (core.graph.interface.latticeconcept.MultiscaleContainer method) composite_dependencies() (in module core.pm_extend) CompositeNode (class in core.compositenode) CompositeNodeFactory (class in core.compositenode) CompositeNodeInput (class in core.compositenode) CompositeNodeOutput (class in core.compositenode) composites() (in module core.pm_extend) compute_external_io() (core.compositenode.CompositeNode method) compute_io() (core.compositenode.CompositeNode method) compute_layout() (in module core.vlab) compute_rank() (in module image.registration.matrix) config_file (openalea.oalab.config.main.MainConfig attribute) config_filename (core.project.project.Project attribute) ConfigObj (class in core.project.configobj) ConfigObjError ConfigspecError connect() (core.compositenode.CompositeNode method) (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) (in module image.gui.slide_viewer_widget) (in module openalea.oalab.plugin.builtin.lab.minilab) connect_applet() (openalea.oalab.plugin.builtin.lab.minilab.MiniLab class method) connect_loggers_to_handlers() (core.logger.LoggerOffice method) (in module core.logger) connected_edges() (core.dataflow.DataFlow method) connected_ports() (core.dataflow.DataFlow method) connections (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) (openalea.oalab.plugin.lab.ILab attribute) consolidate() (openalea.grapheditor.interfaces.IGraphViewFloatingEdge method) constraints() (openalea.oalab.control.editor.ControlEditor method) (openalea.oalab.plugin.oalab.control.IConstraintWidget method) Container (class in core.graph.interface.latticeconcept) container() (core.graph.interface.latticeconcept.MultiscaleContainer method) content (core.data.Data attribute) contentsContextMenuEvent() (openalea.oalab.shell.shell.PyCutExt method) contextMenuEvent() (openalea.oalab.control.model_view.ControlView method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.visualea.mainwindow.MainWindow method) (openalea.visualea.node_treeview.DataPoolListView method) (openalea.visualea.node_treeview.NodeFactoryView method) ContextualMenu (class in openalea.oalab.plugin.builtin.applet) ContinuousEvalListener (class in core.compositenode) Control (class in core.control.control) (class in openalea.oalab_wralea.oalabnode) control shape, [1] control() (core.control.manager.ControlContainer method) (openalea.oalab.control.editor.ControlEditor method) (openalea.oalab.control.model_view.ControlModel method) control_dict() (in module core.control.manager) ControlContainer (class in core.control.manager) ControlDeserializer (class in core.control.serialization) ControlEditor (class in openalea.oalab.control.editor) ControlLoader (class in core.control.serialization) ControlManager (class in core.control.manager) (class in openalea.oalab.plugin.builtin.applet) ControlManagerWidget (class in openalea.oalab.control.manager) ControlModel (class in openalea.oalab.control.model_view) controlpanel (openalea.oalab.config.gui.MainWindowConfig attribute) controls (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginBoolWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginStringWidgetSelector attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) controls() (core.control.manager.ControlContainer method) ControlSaver (class in core.control.serialization) ControlSerializer (class in core.control.serialization) controlsSelected (openalea.oalab.control.model_view.ControlView attribute) controlValueChanged (openalea.oalab.control.qcontainer.QControlContainer attribute) ControlView (class in openalea.oalab.control.model_view) ControlWidgetSelectorPlugin (class in openalea.oalab.plugin.oalab.control) coordinates() (image.gui.point_selection.PointSelection method) copy() (core.compositenode.CompositeNodeFactory method) (core.graph.interface.graph.ICopyGraph method) (core.graph.interface.graphconcept.CopyConcept method) (core.node.AbstractFactory method) (core.node.NodeFactory method) (core.path.path method) copy2() (core.path.path method) copy_to() (core.compositenode.CompositeNode method) (core.node.AbstractPort method) (core.node.Node method) CopyConcept (class in core.graph.interface.graphconcept) copyfile() (core.path.path method) copymode() (core.path.path method) copystat() (core.path.path method) copytree() (core.path.path method) core (module) core.actor (module) core.alea (module) core.algo (module) core.algo.dataflow_copy (module) core.algo.dataflow_evaluation (module)

core.authors (module) core.category (module) core.cli (module) core.codegen (module) core.color_palette (module) core.compositenode (module) core.control (module) core.control.all (module) core.control.control (module) core.control.manager (module) core.control.pyserial (module) core.control.serialization (module) core.ctypes_ext (module) core.customexception (module) core.data (module) core.dataflow (module) core.datapool (module) core.export_app (module) core.external (module) core.factory (module) core.factory_decorator (module) core.factory_parser (module) core.formatting (module) core.formatting.html (module) core.formatting.util (module) core.funcsigs (module) core.graph (module) core.graph.graph (module) core.graph.id_generator (module) core.graph.interface (module) core.graph.interface.graph (module) core.graph.interface.graphconcept (module) core.graph.interface.latticeconcept (module) core.graph.interface.port_graph (module) core.graph.interface.property_graph (module) core.graph.interface.treeconcept (module) core.graph.property_graph (module) core.interface (module) core.interpreter (module) core.interpreter.ipython (module) core.interpreter.python (module) core.logger (module) core.manager (module) core.metaclass (module) core.metadatadict (module) core.model (module) core.node (module) core.observer (module) core.package (module) core.path (module) core.pkgdict (module) core.pkgmanager (module) core.plugin (module) core.plugin.builtin (module) core.plugin.formatting (module) core.plugin.formatting.html (module) core.plugin.formatting.text (module) core.plugin.formatting.util (module) core.plugin.functor (module) core.plugin.instance (module) core.plugin.interface (module) core.plugin.manager (module) core.plugin.node (module) core.plugin.plugin (module) core.pm_extend (module) core.project (module) core.project.configobj (module) core.project.formatting (module) core.project.formatting.html (module) core.project.manager (module) core.project.project (module) core.project.serialization (module) core.scene (module) core.scene.vplscene (module) core.script_library (module) core.serialization (module) core.service (module) core.service.control (module) core.service.data (module) core.service.interface (module) core.service.introspection (module) core.service.ipython (module) core.service.mimetype (module) core.service.model (module) core.service.plugin (module) core.service.project (module) core.service.run (module) core.service.serialization (module) core.session (module) core.settings (module) core.signature (module) core.signature2 (module) core.singleton (module) core.system (module) core.system.systemnodes (module) core.threadmanager (module) core.traitsui (module) core.unittest_tools (module) core.util (module) core.version (module) core.vlab (module) core.world (module) core.world.world (module) count (openalea.oalab.plot2d.figurewidget.MplFigureWidget attribute) Counter (class in core.system.systemnodes) counters (openalea.oalab.control.editor.ControlEditor attribute) CPickleLoader (class in core.serialization) CPickleSaver (class in core.serialization) cproject (core.project.manager.ProjectManager attribute) create mode, [1] create() (core.project.manager.ProjectManager method) (openalea.oalab.plugin.oalab.control.IWidgetSelector class method) create_actions() (openalea.oalab.control.qcontainer.QControlContainer method) create_control() (in module core.service.control) create_edge_widget() (openalea.grapheditor.interfaces.IGraphViewStrategies method) create_fake_node() (core.compositenode.CompositeNodeFactory method) create_menu() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.oalab.project.projecteditor.ProjectEditorView method) create_project_shortcut() (in module openalea.oalab.project.symlink) create_readers() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) create_shape (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) create_singleton() (openalea.oalab.plot2d.mplwidget.AbstractMplWidget class method) create_user_compositenode() (core.package.UserPackage method) (openalea.core.package.UserPackage method) create_user_node() (core.package.UserPackage method) (openalea.core.package.UserPackage method) create_user_package() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) create_vertex_widget() (openalea.grapheditor.interfaces.IGraphViewStrategies method) create_view() (openalea.grapheditor.interfaces.IGraphViewStrategies method) createEditor() (openalea.oalab.control.model_view.ValueControlDelegate method) CreateProjectWidget (class in openalea.oalab.project.creator) criteria (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) (openalea.oalab.plugin.builtin.interface.OpenAleaLabInterfacePlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginBoolWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginStringWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinControlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinDataCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinModelCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.UrlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.PythonModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.RModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.TextualModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.VisualeaModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.project.Tutorial attribute) (openalea.oalab.pluginwidget.explorer.PluginExplorer attribute) (openalea.oalab.project.explorer.ProjectExplorer attribute) (openalea.oalab.testing.mimedata.SampleCustomDataCodecPlugin attribute) critical() (in module core.logger) crop() (in module image_wralea.interpolation.interpolation) ctime (core.path.path attribute) current_slice() (image.gui.pixmap_view.PixmapStackView method) current_view() (openalea.visualea.mainwindow.MainWindow method) customEvent() (openalea.oalab.shell.shell.PyCutExt method) (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) CustomException

D

DARK_STYLE (openalea.oalab.editor.pyeditor.editor.PyCodeEditor attribute) Data (class in core.data) data (core.world.world.WorldObject attribute) data() (in module core.pm_extend) (openalea.oalab.control.model_view.ControlModel method) (openalea.visualea.node_treeview.DataPoolModel method) (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) data_coordinates() (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) DataClass() (in module core.service.data) DataFactory (class in core.data) DataFactory() (in module core.service.data) datafactory_template (core.data.PyDataFactoryWriter attribute) DataFlow (class in core.dataflow) DataNode (class in core.data) DataPool (class in core.datapool) DataPoolListView (class in openalea.visualea.node_treeview) DataPoolModel (class in openalea.visualea.node_treeview) DataType() (in module core.service.data) db_connexion() (in module core.algo.dataflow_evaluation) db_create() (in module core.algo.dataflow_evaluation) debug (core.plugin.instance.PluginInstanceManager attribute) debug() (in module core.logger) (openalea.oalab.testing.applet.TestMainWin method) (openalea.visualea.mainwindow.MainWindow method) debug_plugins() (in module core.service.plugin) declare_interface() (core.interface.InterfaceWidgetMap method) (core.interface.TypeInterfaceMap method) (core.interface.TypeNameInterfaceMap method) decode (openalea.oalab.mimedata.plugin.MimeCodecPlugin attribute) decode() (in module core.service.mimetype) (in module openalea.oalab.service.mimedata) (openalea.oalab.mimedata.builtin.BuiltinControlCodec method) (openalea.oalab.mimedata.builtin.BuiltinDataCodec method) (openalea.oalab.mimedata.builtin.BuiltinModelCodec method) (openalea.oalab.mimedata.builtin.UrlCodec method) (openalea.oalab.mimedata.codec.MimeCodec method) (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.testing.mimedata.SampleCustomDataCodec method) decode_function() (in module openalea.oalab.service.mimedata) decode_plugin() (in module openalea.oalab.service.mimedata) decode_project_item() (in module openalea.oalab.mimedata.builtin) decorators() (core.codegen.SourceGenerator method) default (core.control.control.Control attribute) (core.funcsigs.Parameter attribute) default() (core.interface.IBool class method) (core.interface.IDict class method) (core.interface.IFloat class method) (core.interface.IInt class method) (core.interface.IInterface class method) (core.interface.ISequence class method) (core.interface.IStr class method) (core.interface.ITuple3 class method) (core.project.manager.ProjectManager method) (openalea.oalab.interface.IColormap class method) (openalea.oalab.interface.IIntRange class method) DEFAULT_CATEGORIES (core.project.project.Project attribute) default_file_name (core.data.Data attribute) (core.data.PythonFile attribute) (core.plugin.builtin.PythonFile attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.textual.TextualModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) default_init() (in module core.logger) DEFAULT_METADATA (core.project.project.Project attribute) default_name (core.data.Data attribute) (core.data.PythonFile attribute) (core.model.PythonModel attribute) (core.plugin.builtin.PythonFile attribute) (core.serialization.BGEOMLoader attribute) (core.serialization.BGEOMSaver attribute) (core.serialization.BinaryLoader attribute) (core.serialization.BinarySaver attribute) (core.serialization.CPickleLoader attribute) (core.serialization.CPickleSaver attribute) (core.serialization.GenericLoader attribute) (core.serialization.GenericTextSaver attribute) (core.serialization.IDeserializer attribute) (core.serialization.ILoader attribute) (core.serialization.ISaver attribute) (core.serialization.ISerializer attribute) (core.serialization.PythonLoader attribute) (openalea.core.model.PythonModel attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.textual.TextualModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) default_plugin_manager() (in module core.service.plugin) default_project_manager() (in module core.service.project) defaultdir (core.project.manager.ProjectManager attribute) DefaultEvaluation (in module core.algo.dataflow_evaluation) defaultHandlerNames (in module core.logger) DefaultLab (class in openalea.oalab.plugin.builtin.lab.default) del_point() (image.gui.point_selection.PointSelection method) Delay (class in core.system.systemnodes) delay (core.node.Node attribute) delete() (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (core.project.project.Project method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) delete_control() (openalea.oalab.control.model_view.ControlView method) dependencies() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method)

desactivate_in_pyplot() (in module openalea.oalab.plot2d) desc (core.customexception.CustomException attribute) (core.project.project.ErrorItemExistsInProject attribute) (openalea.oalab.mimedata.exception.MimeConversionError attribute) deserialize() (core.control.serialization.ControlDeserializer method) (core.serialization.AbstractDeserializer method) (core.serialization.IDeserializer method) (in module core.service.serialization) destroy() (openalea.oalab.plot2d.mplwidget.FigureManagerQTwithTab method) DictionaryCompleter (class in openalea.oalab.editor.completion) dirname() (core.path.path method) dirs() (core.path.path method) disable_followers() (core.control.manager.ControlContainer method) disconnect() (core.compositenode.CompositeNode method) (core.graph.interface.port_graph.IPortGraph method) (in module image.gui.slide_viewer_widget) disconnect_loggers_from_handlers() (core.logger.LoggerOffice method) (in module core.logger) discover() (core.manager.GenericManager method) (core.plugin.manager.PluginManager method) (core.project.manager.ProjectManager method) (in module core.plugin.plugin) (openalea.core.plugin.manager.PluginManager method) discover_qt_controls() (in module openalea.oalab.service.qt_control) DiscreteTimeEvaluation (class in core.algo.dataflow_evaluation) display() (in module image.gui.slide_viewer) display_error_color() (in module core.customexception) display_history() (in module openalea.oalab.service.history) display_leftpanel() (openalea.visualea.mainwindow.MainWindow method) display_line_number() (openalea.oalab.editor.text_editor.TextEditor method) display_rightpanel() (openalea.visualea.mainwindow.MainWindow method) distribution (core.plugin.plugin.IPlugin attribute) do_type_checking() (core.metadatadict.MetaDataDict method) drag_enter_event() (openalea.oalab.drag_and_drop.DropHandler method) drag_leave_event() (openalea.oalab.drag_and_drop.DropHandler method) drag_move_event() (openalea.oalab.drag_and_drop.DropHandler method) DragAndDropWidget (class in openalea.oalab.testing.drag_and_drop) dragEnterEvent() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) (openalea.oalab.shell.shell.PyCutExt method) (openalea.visualea.mainwindow.MainWindow method) (openalea.visualea.node_treeview.DataPoolListView method) (openalea.visualea.node_treeview.NodeFactoryView method) DragHandler (class in openalea.oalab.drag_and_drop) DragModel (class in openalea.oalab.testing.drag_and_drop) dragMoveEvent() (openalea.oalab.shell.shell.PyCutExt method) (openalea.visualea.node_treeview.DataPoolListView method) (openalea.visualea.node_treeview.NodeFactoryView method) DragWidget (class in openalea.oalab.testing.drag_and_drop) draw_if_interactive() (in module openalea.oalab.plot2d.figurewidget) drive (core.path.path attribute) drop() (openalea.oalab.testing.drag_and_drop.DropWidget method) drop_event() (openalea.oalab.drag_and_drop.DropHandler method) DROP_PLUGIN (core.plugin.plugin.PluginDef attribute) dropEvent() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) (openalea.oalab.shell.shell.PyCutExt method) (openalea.visualea.mainwindow.MainWindow method) (openalea.visualea.node_treeview.DataPoolListView method) (openalea.visualea.node_treeview.NodeFactoryView method) DropHandler (class in openalea.oalab.drag_and_drop) dropMimeData() (openalea.oalab.project.qtmodel.ProjectModel method) DropSelectorMenu (class in openalea.oalab.drag_and_drop) DropSelectorWidget (class in openalea.oalab.drag_and_drop) DropWidget (class in openalea.oalab.testing.drag_and_drop) dtype (core.control.serialization.ControlLoader attribute) (core.control.serialization.ControlSaver attribute) (core.model.IModel attribute) (core.model.PythonModel attribute) (core.plugin.builtin.PythonModel attribute) (core.project.serialization.ProjectLoader attribute) (core.project.serialization.ProjectSaver attribute) (core.serialization.IDeserializer attribute) (core.serialization.ILoader attribute) (core.serialization.ISaver attribute) (core.serialization.ISerializer attribute) (openalea.core.model.IModel attribute) (openalea.core.model.PythonModel attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) dtype() (openalea.oalab.paradigm.creator.ParadigmInfoSelector method) (openalea.oalab.project.dialog.SelectCategory method) duplicate_package() (openalea.visualea.node_treeview.NodeFactoryView method) DuplicateError DynamicPackage (class in core.package) (class in openalea.core.package)

E

edge() (core.graph.interface.graph.IGraph method) (core.graph.interface.graphconcept.GraphConcept method) edge_added() (openalea.grapheditor.interfaces.IGraphListener method) edge_id() (core.graph.interface.graphconcept.MutableEdgeGraphConcept method) edge_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) edge_property_names() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) edge_removed() (openalea.grapheditor.interfaces.IGraphListener method) EdgeListGraphConcept (class in core.graph.interface.graphconcept) edges() (core.algo.dataflow_evaluation.Provenance method) (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) edit mode, [1] edit() (image.gui.oalab.control.IImageSelector class method) (in module openalea.oalab.service.qt_control) (openalea.oalab.control.selector.ColormapWidgetSelector class method) (openalea.oalab.control.selector.FloatWidgetSelector class method) (openalea.oalab.control.selector.IntRangeWidgetSelector class method) (openalea.oalab.control.selector.IntWidgetSelector class method) (openalea.oalab.plugin.oalab.control.IWidgetSelector class method) edit_constraints() (openalea.oalab.control.selector.FloatWidgetSelector class method) (openalea.oalab.control.selector.IntRangeWidgetSelector class method) (openalea.oalab.control.selector.IntWidgetSelector class method) (openalea.oalab.plugin.oalab.control.IWidgetSelector class method) edit_metadata() (in module openalea.oalab.project.dialog) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) edit_node() (openalea.visualea.node_treeview.NodeFactoryView method) edit_package() (openalea.visualea.node_treeview.NodeFactoryView method) edit_pkg_code() (openalea.visualea.node_treeview.NodeFactoryView method) edit_properties() (openalea.visualea.node_treeview.NodeFactoryView method) edit_shape (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginBoolWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginStringWidgetSelector attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) EditableTreeConcept (class in core.graph.interface.treeconcept) EditorManager (class in openalea.oalab.plugin.builtin.applet) editors (core.vlab.VlabObject attribute) element() (core.graph.interface.latticeconcept.MultiscaleContainer method) elements() (core.graph.interface.latticeconcept.Container method) emit_stack_changed() (image.gui.slide_viewer_widget.ImageStackViewerWidget method) emit_update() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) empty (core.funcsigs.Parameter attribute) (core.funcsigs.Signature attribute) empty_image_like() (in module image.spatial_image) enable_followers() (core.control.manager.ControlContainer method) encode (openalea.oalab.mimedata.plugin.MimeCodecPlugin attribute) encode() (in module core.service.mimetype) (in module openalea.oalab.service.mimedata) (openalea.oalab.mimedata.builtin.BuiltinControlCodec method) (openalea.oalab.mimedata.builtin.BuiltinDataCodec method) (openalea.oalab.mimedata.builtin.BuiltinModelCodec method) (openalea.oalab.mimedata.codec.MimeCodec method) (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.testing.mimedata.SampleCustomDataCodec method) encode_project_item() (in module openalea.oalab.mimedata.builtin) encode_to_qmimedata() (in module openalea.oalab.drag_and_drop) end_margin() (in module image.algo.basic) end_time() (core.algo.dataflow_evaluation.Provenance method)

enhanced_error() (in module core.plugin.instance) entry_point category error() (in module core.logger) ErrorItemExistsInProject eval() (core.actor.IActor method) (core.algo.dataflow_evaluation.AbstractEvaluation method) (core.algo.dataflow_evaluation.BrutEvaluation method) (core.algo.dataflow_evaluation.DiscreteTimeEvaluation method) (core.algo.dataflow_evaluation.GeneratorEvaluation method) (core.algo.dataflow_evaluation.LambdaEvaluation method) (core.algo.dataflow_evaluation.PriorityEvaluation method) (core.algo.dataflow_evaluation.SciFlowareEvaluation method) (core.algo.dataflow_evaluation.ToScriptEvaluation method) (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeInput method) (core.compositenode.CompositeNodeOutput method) (core.node.Node method) (core.system.systemnodes.AnnotationNode method) (core.system.systemnodes.Counter method) (core.system.systemnodes.IterNode method) (core.system.systemnodes.IterWithDelayNode method) (core.system.systemnodes.StopSimulation method) eval_as_expression() (core.compositenode.CompositeNode method) eval_value() (core.model.Model method) (openalea.core.model.Model method) (openalea.oalab.model.visualea.VisualeaModel method) eval_vertex() (core.algo.dataflow_evaluation.BrutEvaluation method) (core.algo.dataflow_evaluation.DiscreteTimeEvaluation method) (core.algo.dataflow_evaluation.GeneratorEvaluation method) (core.algo.dataflow_evaluation.LambdaEvaluation method) (core.algo.dataflow_evaluation.SciFlowareEvaluation method) (core.algo.dataflow_evaluation.ToScriptEvaluation method) eval_vertex_code() (core.algo.dataflow_evaluation.AbstractEvaluation method) EvaluationException events (core.unittest_tools.EventTracker attribute) EventTracker (class in core.unittest_tools) example() (core.interface.IInt method) exec_python_script() (openalea.visualea.mainwindow.MainWindow method) execute() (core.model.Model method) (openalea.core.model.Model method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.python.PythonModelController method) (openalea.oalab.paradigm.r.RModelController method) (openalea.oalab.paradigm.textual.TextualModelController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) existing_connections (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) exists() (core.data.Data method) (core.path.path method) (core.settings.Settings method) expand() (core.path.path method) expanded() (openalea.visualea.node_treeview.NodeFactoryTreeView method) expanduser() (core.path.path method) expandvars() (core.path.path method) export_app() (in module core.export_app) export_image() (openalea.visualea.mainwindow.MainWindow method) export_image_svg() (openalea.visualea.mainwindow.MainWindow method) export_lpy() (openalea.oalab.control.model_view.ControlView method) ext (core.path.path attribute) extend() (core.graph.graph.Graph method) (core.graph.interface.graph.IExtendGraph method) (core.graph.interface.graphconcept.ExtendConcept method) (core.graph.property_graph.PropertyGraph method) extend_ad_hoc_slots() (core.metadatadict.HasAdHoc class method) ExtendConcept (class in core.graph.interface.graphconcept) extension (core.data.Data attribute) (core.data.PythonFile attribute) (core.plugin.builtin.PythonFile attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.textual.TextualModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) external_edit_required (openalea.oalab.control.model_view.ValueControlDelegate attribute) external_edition() (openalea.oalab.control.model_view.ValueControlDelegate method) extract_functions() (in module openalea.oalab.model.parse)

F

Factory (in module core.node) factory() (core.plugin.functor.PluginFunctor static method) (in module core.factory_decorator) FactoryExistsError, [1] fakeUser() (openalea.oalab.shell.shell.PyCutExt method) FigureManagerQT (class in openalea.oalab.plot2d.figurewidget) FigureManagerQTwithTab (class in openalea.oalab.plot2d.mplwidget) FileBrowser (class in openalea.oalab.plugin.builtin.applet) filename (core.data.Data attribute) filename_to_module() (core.package.PyPackageReader method) (openalea.core.package.PyPackageReader method) files() (core.path.path method) fill_infos() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) filter_authors() (in module openalea.oalab.pluginwidget.explorer) filter_changed (openalea.oalab.manager.explorer.FilterBox attribute) filter_team() (in module openalea.oalab.pluginwidget.explorer) FilterBox (class in openalea.oalab.manager.explorer) finalize() (openalea.oalab.plugin.builtin.lab.fulllab.FullLab class method) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab class method) find_all_wralea() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) find_and_register_packages() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) find_closest_connectable() (openalea.grapheditor.interfaces.IGraphListener method) find_free_name() (core.script_library.ScriptLibrary method) find_library() (in module core.ctypes_ext) find_node() (openalea.visualea.mainwindow.MainWindow method) find_vlab_dir() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) find_wralea_dir() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) find_wralea_files() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) findCaller() (core.logger.PatchedPyLogger method) fine_tune() (openalea.oalab.paradigm.container.ParadigmContainer method)

finer() (core.graph.interface.latticeconcept.ScaleLattice method) finest() (core.graph.interface.latticeconcept.ScaleLattice method) first_child() (core.graph.interface.treeconcept.OrderedTreeConcept method) fix_indentation() (in module openalea.oalab.editor.text_editor) flags() (openalea.oalab.control.model_view.ControlModel method) (openalea.visualea.node_treeview.DataPoolModel method) (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) flatten() (in module image.algo.basic) flatten_errors() (in module core.project.configobj) FloatWidgetSelector (class in openalea.oalab.control.selector) flush() (openalea.oalab.shell.shell.PyCutExt method) (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) (openalea.oalab.shell.streamredirection.MultipleRedirection method) (openalea.oalab.shell.streamredirection.ThreadedRedirection method) fnmatch() (core.path.path method) focusInEvent() (openalea.oalab.editor.text_editor.TextEditor method) follow_events() (core.control.manager.Follower method) Follower (class in core.control.manager) For (class in core.system.systemnodes) format_author() (in module core.plugin.formatting.text) format_criterion() (in module core.plugin.formatting.text) format_html() (in module core.plugin.formatting.html) format_label_author() (in module openalea.oalab.pluginwidget.explorer) format_label_team() (in module openalea.oalab.pluginwidget.explorer) format_str() (in module core.plugin.formatting.text) fps_changed() (image_wralea.gui.animator_widget.AnimatorWidget method) frame_list() (in module image_wralea.gui.frame) FrameAnimator (class in image.gui.animator) from_function() (core.funcsigs.Signature class method) FullLab (class in openalea.oalab.plugin.builtin.lab.fulllab) FuncNode (class in core.node) function() (core.plugin.instance.PluginInstanceManager method) (in module core.alea)

G

gen_port_list() (in module core.node) generate_item_id() (core.manager.GenericManager method) (core.plugin.manager.PluginManager method) (core.project.manager.ProjectManager method) (openalea.core.plugin.manager.PluginManager method) generate_item_name() (core.manager.GenericManager method) (core.plugin.manager.PluginManager class method) (openalea.core.plugin.manager.PluginManager class method) GeneratorEvaluation (class in core.algo.dataflow_evaluation) GenericHighlighter (class in openalea.oalab.editor.highlight) GenericLoader (class in core.serialization) GenericManager (class in core.manager) GenericTextSaver (class in core.serialization) geom_size() (in module image_wralea.image) get() (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (core.pkgdict.PackageDict method) (core.pkgmanager.PackageManager method) (core.project.project.Project method) (core.settings.Settings method) (core.world.world.WorldObject method) (openalea.core.pkgmanager.PackageManager method) get_ad_hoc_dict() (core.metadatadict.HasAdHoc method) get_all_parameters() (core.signature.Signature method) get_all_parent_nodes() (core.dataflow.DataFlow method) get_applet() (in module openalea.oalab.service.applet) get_applets() (in module openalea.oalab.service.applet) get_authors() (core.node.AbstractFactory method) get_block() (core.node.Node method) get_callable_arguments() (core.signature.Signature static method) get_caption() (core.node.Node method) get_classobj() (core.node.NodeFactory method) (openalea.oalab.model.visualea.ModelNodeFactory method) get_code() (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) get_color() (openalea.oalab.colormap.colormap_utils.Colormap method) (openalea.oalab.shell.shell.SyntaxColor method) get_composite_nodes() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_connections() (openalea.grapheditor.interfaces.IGraphViewFloatingEdge method) get_connector_types() (openalea.grapheditor.interfaces.IGraphViewStrategies method) get_control() (in module core.service.control) get_copyright() (in module openalea.oalab.metainfo) get_criteria() (in module core.project.manager) get_current_pkg() (openalea.visualea.node_treeview.NodeFactoryView method) get_current_workspace() (core.session.Session method) get_data() (core.pkgmanager.PackageManager method) (in module core.system.systemnodes) (openalea.core.pkgmanager.PackageManager method) get_database_name() (in module core.algo.dataflow_evaluation) get_datapool_code() (in module core.cli) get_date_format() (core.logger.LoggerOffice method) get_default() (core.node.AbstractPort method) get_default_home_dir() (in module core.settings) get_default_logger() (core.logger.LoggerOffice method) get_delay() (core.node.Node method) get_desc() (core.node.AbstractPort method) get_doc() (core.signature.Signature method) get_docstring() (in module openalea.oalab.model.parse) get_docstring_r() (in module openalea.oalab.model.parse) get_documentation() (core.compositenode.CompositeNodeFactory method) (core.data.Data method) (core.data.PythonFile method) (core.model.Model method) (core.model.PythonModel method) (core.node.AbstractFactory method) (core.node.NodeFactory method) (openalea.core.model.Model method) (openalea.core.model.PythonModel method) (openalea.oalab.model.visualea.ModelNodeFactory method) (openalea.oalab.model.visualea.VisualeaModel method) get_edge_types() (openalea.grapheditor.base.GraphAdapterBase class method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_eval_algo() (core.compositenode.CompositeNode method) get_extra_values() (in module core.project.configobj) get_factories_str() (core.package.PyPackageWriter method) (openalea.core.package.PyPackageWriter method) get_factory() (core.node.AbstractNode method) (core.package.Package method) (openalea.core.package.Package method) get_factory_from_url() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_format() (core.logger.LoggerOffice method) get_full_name() (openalea.visualea.node_treeview.PkgModel method) get_graph_model_type() (openalea.grapheditor.interfaces.IGraphViewStrategies method) get_graph_views() (core.session.Session method) get_handler() (core.logger.LoggerOffice method) (in module core.logger) get_handler_names() (core.logger.LoggerOffice method) (in module core.logger) get_icon() (in module openalea.visualea.node_treeview) get_id() (core.graph.id_generator.IdGenerator method) (core.node.AbstractFactory method) (core.node.AbstractNode method) (core.node.AbstractPort method) (core.package.Package method) (core.pkgmanager.PseudoGroup method) (image.gui.id_generator.IdListGenerator method) (image.gui.id_generator.IdMaxGenerator method) (image.gui.id_generator.IdSetGenerator method) (openalea.core.package.Package method) (openalea.core.pkgmanager.PseudoGroup method) (openalea.oalab.model.visualea.ModelNodeFactory method) get_input() (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeInput method) (core.node.Node method) get_input_port() (core.control.control.Control method) (core.node.Node method) get_input_state() (core.node.Node method) get_interface() (core.node.AbstractPort method) (in module core.service.interface) get_interpreter() (in module core.interpreter) (openalea.oalab.shell.shell.PyCutExt method) (openalea.oalab.shell.shellwidget.ShellWidget method) get_interpreter_class() (in module core.interpreter) get_intput_callback() (in module core.alea) get_item() (core.project.project.Project method) get_item_info() (openalea.visualea.node_treeview.NodeFactoryView static method) get_keywords() (core.signature.Signature method) get_label() (core.control.control.Control method) (core.interface.IInterfaceWidget class method) (core.node.InputPort method) (openalea.oalab.control.widget.OpenAleaControlWidget class method) get_lazy() (core.node.Node method) get_loader() (in module core.service.serialization) get_logger() (core.logger.LoggerOffice method) (in module core.logger) get_logger_names() (core.logger.LoggerOffice method) (in module core.logger) get_metadata() (core.metadatadict.MetaDataDict method) get_metadata_type() (core.metadatadict.MetaDataDict method) get_metainfo() (core.package.Package method) (core.pkgmanager.PseudoPackage method) (openalea.core.package.Package method) (openalea.core.pkgmanager.PseudoPackage method) get_model() (core.project.project.Project method) (in module core.service.run) get_name() (core.signature.Signature method) get_names() (core.package.Package method) (openalea.core.package.Package method) get_nb_input() (core.node.Node method) (core.system.systemnodes.AnnotationNode method) get_nb_output() (core.node.Node method) (core.system.systemnodes.AnnotationNode method) get_noconflict_metaclass() (in module core.metaclass) get_node() (core.pkgmanager.PackageManager method) (in module core.alea) (openalea.core.pkgmanager.PackageManager method) get_node_code() (in module core.cli) get_node_file() (core.node.NodeFactory method) get_node_from_url() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_node_module() (core.node.NodeFactory method) get_node_src() (core.node.NodeFactory method) get_nodes() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_openalea_home_dir() (in module core.settings)

get_openalea_tmp_dir() (in module core.settings) get_output() (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeOutput method) (core.node.Node method) get_owner() (core.path.path method) get_package() (core.vlab.VlabObject method) get_package_from_url() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_packages() (core.pkgmanager.PackageManager method) (in module core.pm_extend) (openalea.core.pkgmanager.PackageManager method) get_parameters() (core.signature.Signature method) get_parent_nodes() (core.algo.dataflow_evaluation.AbstractEvaluation method) get_pixel_value_str() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) get_pkg() (core.node.AbstractFactory method) get_pkg_data() (core.data.DataFactory method) get_pkg_files() (core.package.Package method) (openalea.core.package.Package method) get_pkg_name() (core.package.PyPackageReader method) (openalea.core.package.PyPackageReader method) get_pkgreader() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_plotters() (in module openalea.oalab.service.plot) get_plugin() (in module core.plugin.functor) get_plugin_actions() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) get_pm() (in module core.pm_extend) get_points() (image.gui.point_selection.PointSelection method) get_process_obj() (core.node.FuncNode method) (core.node.Node method) get_project_dir() (in module core.settings) get_provenance() (openalea.visualea.mainwindow.MainWindow method) get_pseudo_cat() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_pseudo_pkg() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_python_name() (core.node.AbstractFactory method) (core.node.NodeFactory method) get_raise_exception() (core.node.AbstractNode method) get_returns() (core.signature.Signature method) get_root() (core.graph.interface.treeconcept.RootedTreeConcept method) get_runnable_model() (core.project.project.Project method) get_saver() (in module core.service.serialization) get_scene_center() (openalea.grapheditor.interfaces.IGraphViewConnectable method) get_selected_text() (openalea.oalab.editor.plaintext_editor.PlainTextEdit method) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) get_shell_class() (in module openalea.oalab.shell.shell) get_singleton() (openalea.oalab.plot2d.mplwidget.AbstractMplWidget class method) get_state() (core.interface.IInterfaceWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) get_str() (core.package.PyPackageWriter method) (openalea.core.package.PyPackageWriter method) get_text() (openalea.oalab.editor.plaintext_editor.PlainTextEdit method) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) get_tip() (core.node.AbstractFactory method) (core.node.AbstractPort method) (core.node.Node method) (core.package.Package method) (core.pkgmanager.PseudoGroup method) (core.pkgmanager.PseudoPackage method) (openalea.core.package.Package method) (openalea.core.pkgmanager.PseudoGroup method) (openalea.core.pkgmanager.PseudoPackage method) get_user_application() (core.node.Node method) get_user_packages() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) get_userpkg_dir() (in module core.settings) get_value() (core.interface.IInterfaceWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) get_values() (openalea.oalab.colormap.colormap_utils.Colormap method) get_varargs() (core.signature.Signature method) get_version() (in module openalea.oalab.metainfo) get_vertex() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_vertex_input() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_vertex_inputs() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_vertex_output() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_vertex_outputs() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_vertex_types() (openalea.grapheditor.base.GraphAdapterBase class method) (openalea.grapheditor.interfaces.IGraphAdapter method) get_view_data() (openalea.grapheditor.interfaces.IGraphViewElement method) get_welcome_msg() (in module core.cli) get_widget_value() (core.interface.IInterfaceWidget method) get_window() (openalea.oalab.plot2d.mplwidget.AbstractMplWidget method) get_wralea_path() (core.package.Package method) (core.pkgmanager.PackageManager method) (openalea.core.package.Package method) (openalea.core.pkgmanager.PackageManager method) get_writer() (core.compositenode.CompositeNodeFactory method) (core.data.DataFactory method) (core.node.AbstractFactory method) (core.node.NodeFactory method) (openalea.oalab.model.visualea.ModelNodeFactory method) getatime() (core.path.path method) getctime() (core.path.path method) getcwd() (core.path.path class method) getDesc() (core.customexception.CustomException method) getIndex() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) getItem() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) getMessage() (core.customexception.CustomException method) getmtime() (core.path.path method) getScene() (core.scene.vplscene.VPLScene method) getsize() (core.path.path method) getTitle() (core.customexception.CustomException method) glob() (core.path.path method) global_module() (in module core) global_toolbar_actions() (openalea.oalab.plugin.applet.IApplet method) go() (openalea.oalab.editor.goto.GoToWidget method) go_to_line() (openalea.oalab.editor.text_editor.TextEditor method) goto() (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) GoToWidget (class in openalea.oalab.editor.goto) grab_icon() (openalea.visualea.node_treeview.NodeFactoryView method) Graph (class in core.graph.graph) GraphAdapterBase (class in openalea.grapheditor.base) GraphConcept (class in core.graph.interface.graphconcept) GraphError, [1] GraphicalStreamRedirection (class in openalea.oalab.shell.streamredirection) GraphStrategyMaker() (in module openalea.grapheditor.base) grayscale() (in module image.gui.palette) grayscale_alpha() (in module image.gui.palette) grey2color() (in module image.algo.basic) Group (class in core.traitsui) group_controls() (in module core.service.control) groupby() (openalea.oalab.manager.explorer.ManagerExplorer method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) (openalea.oalab.manager.explorer.ManagerExplorerView method) (openalea.oalab.pluginwidget.explorer.PluginExplorer method) (openalea.oalab.project.explorer.ProjectExplorer method) guess_interface() (in module core.service.interface)

H

has_edge() (core.graph.graph.Graph method) (core.graph.interface.graph.IGraph method) (core.graph.interface.graphconcept.GraphConcept method) has_element() (core.graph.interface.latticeconcept.Container method) has_instance() (core.plugin.instance.PluginInstanceManager method) has_key() (core.pkgdict.PackageDict method) (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) has_vertex() (core.graph.graph.Graph method) (core.graph.interface.graph.IGraph method) (core.graph.interface.graphconcept.GraphConcept method) HasAdHoc (class in core.metadatadict) hasMultipleStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) hasMultipleStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) headerData() (openalea.oalab.control.model_view.ControlModel method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) (openalea.visualea.node_treeview.DataPoolModel method) (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) help() (openalea.visualea.mainwindow.MainWindow method) HelpWidget (class in openalea.oalab.plugin.builtin.applet) helpwidget (openalea.oalab.config.gui.MainWindowConfig attribute)

high_level() (in module image.algo.basic) highlightBlock() (openalea.oalab.editor.highlight.Highlighter method) Highlighter (class in openalea.oalab.editor.highlight) HistoryWidget (class in openalea.oalab.plugin.builtin.applet) hold() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) html_item_summary() (in module core.project.formatting.html) html_list() (in module core.formatting.html) html_metainfo_summary() (in module core.project.formatting.html) html_project_summary() (in module core.project.formatting.html) (in module openalea.oalab.project.preview) html_section() (in module core.formatting.html) html_summary() (in module core.plugin.formatting.html) HTMLColorToRGB() (in module core.color_palette)

I

IActor (class in core.actor) IApplet (class in openalea.oalab.plugin.applet) IBool (class in core.interface) ICodeStr (class in core.interface) IColormap (class in openalea.oalab.interface) icon (core.data.Data attribute) (core.data.PythonFile attribute) (core.model.Model attribute) (core.plugin.builtin.PythonFile attribute) (openalea.core.model.Model attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.textual.TextualModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.applet.ControlManager attribute) (openalea.oalab.plugin.builtin.applet.EditorManager attribute) (openalea.oalab.plugin.builtin.applet.FileBrowser attribute) (openalea.oalab.plugin.builtin.applet.HelpWidget attribute) (openalea.oalab.plugin.builtin.applet.HistoryWidget attribute) (openalea.oalab.plugin.builtin.applet.Logger attribute) (openalea.oalab.plugin.builtin.applet.MplFigureWidget attribute) (openalea.oalab.plugin.builtin.applet.MplTabWidget attribute) (openalea.oalab.plugin.builtin.applet.PkgManagerWidget attribute) (openalea.oalab.plugin.builtin.applet.ProjectManager attribute) (openalea.oalab.plugin.builtin.applet.ShellWidget attribute) (openalea.oalab.plugin.builtin.applet.SplitterApplet attribute) (openalea.oalab.plugin.builtin.applet.World attribute) (openalea.oalab.plugin.builtin.applet.WorldControl attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) (openalea.oalab.plugin.lab.ILab attribute) icon size icon_path (core.project.project.Project attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) icon_path() (in module core.formatting.util) IConstraintWidget (class in openalea.oalab.plugin.oalab.control) IControlWidget (class in openalea.oalab.plugin.oalab.control) ICopyGraph (class in core.graph.interface.graph) IData (class in core.interface) IDateTime (class in core.interface) identifier (core.control.control.Control attribute) (core.plugin.plugin.IPlugin attribute) (openalea.oalab.paradigm.container.ParadigmContainer attribute) (openalea.oalab.plugin.oalab.paradigm.IParadigmApplet attribute) identity() (in module image.registration.matrix) IDeserializer (class in core.serialization) IdGenerator (class in core.graph.id_generator) (class in image.gui.id_generator) IDict (class in core.interface) IDirStr (class in core.interface) IdListGenerator (class in image.gui.id_generator) IdMaxGenerator (class in image.gui.id_generator) IdSetGenerator (class in image.gui.id_generator) IEdgeListGraph (class in core.graph.interface.graph) IEnumStr (class in core.interface) IExtendGraph (class in core.graph.interface.graph) IFileStr (class in core.interface) IFloat (class in core.interface) IFunction (class in core.interface) ignore (core.vlab.VlabObject attribute) ignore_events() (core.control.manager.Follower method) IGraph (class in core.graph.interface.graph) IGraphAdapter (class in openalea.grapheditor.interfaces) IGraphListener (class in openalea.grapheditor.interfaces) IGraphViewAnnotation (class in openalea.grapheditor.interfaces) IGraphViewConnectable (class in openalea.grapheditor.interfaces) IGraphViewEdge (class in openalea.grapheditor.interfaces) IGraphViewElement (class in openalea.grapheditor.interfaces) IGraphViewFloatingEdge (class in openalea.grapheditor.interfaces) IGraphViewStrategies (class in openalea.grapheditor.interfaces) IGraphViewVertex (class in openalea.grapheditor.interfaces) IImage (class in image_wralea.image_interface) IImageCodecPlugin (class in image.plugin.oalab) IImageFilteringPlugin (class in image.plugin.algo) IImageInterfacePlugin (class in image.plugin.interface) IImagePainter (class in image.gui.oalab.control) IImageSelector (class in image.gui.oalab.control) IImageViewer (class in image.gui.oalab.control) IImageWidget (class in image_wralea.image_interface_widget) IImageWidgetSelectorPlugin (class in image.plugin.oalab) IInt (class in core.interface) IInterface (class in core.interface) IInterfaceMetaClass (class in core.interface) (class in openalea.grapheditor.interfaces) IInterfaceWidget (class in core.interface) IIntRange (class in openalea.oalab.interface) ILab (class in openalea.oalab.plugin.lab) IllFormedUrlError, [1] ILoader (class in core.serialization) image (module) image() (image.gui.pixmap_view.PixmapView method) (in module image_wralea.image) (in module image_wralea.spatial_image) image.algo (module) image.algo.basic (module) image.algo.image_filtering (module) image.algo.morpho (module) image.algo.segmentation (module) image.editor (module) image.gui (module) image.gui.all (module) image.gui.animator (module) image.gui.colormaps (module) image.gui.icons_rc (module) image.gui.id_generator (module) image.gui.oalab (module) image.gui.oalab.applet (module) image.gui.oalab.control (module) image.gui.palette (module) image.gui.pixmap (module) image.gui.pixmap_view (module) image.gui.point_selection (module) image.gui.slide_viewer (module) image.gui.slide_viewer_ui (module) image.gui.slide_viewer_widget (module) image.interpolation (module) image.interpolation.all (module) image.interpolation.interpolation (module) image.pil (module) image.pil.ImageQt (module) image.plugin (module) image.plugin.algo (module) image.plugin.applet (module) image.plugin.interface (module) image.plugin.oalab (module) image.registration (module) image.registration.all (module) image.registration.matrix (module) image.registration.registration (module) image.serial (module) image.serial.all (module) image.serial.basics (module) image.serial.inrimage (module) image.serial.lsm (module) image.serial.tif (module) image.spatial_image (module) image_demo_wralea (module) image_filtering() (in module image.algo.image_filtering) image_wralea (module) image_wralea.algo (module) image_wralea.gui (module) image_wralea.gui.animator_widget (module) image_wralea.gui.frame (module) image_wralea.gui.gui (module) image_wralea.gui.pick_color_widget (module) image_wralea.gui.point_selection_node (module) image_wralea.gui.select_box_widget (module) image_wralea.gui.viewer (module) image_wralea.image (module) image_wralea.image_interface (module) image_wralea.image_interface_widget (module) image_wralea.interpolation (module) image_wralea.interpolation.interpolation (module) image_wralea.palette (module) image_wralea.registration (module) image_wralea.registration.matrix (module) image_wralea.registration.matrix.matrix (module) image_wralea.registration.registration (module) image_wralea.registration.user_registration_widget (module) image_wralea.serial (module) image_wralea.serial.serial (module) image_wralea.spatial_image (module) ImageQt (class in image.pil) (class in image.pil.ImageQt) ImageStackViewer (class in image.gui.oalab.applet) ImageStackViewerPanel (class in image.gui.slide_viewer_widget) ImageStackViewerWidget (class in image.gui.slide_viewer_widget) IModel (class in core.model) (class in openalea.core.model) IModelController (class in openalea.oalab.paradigm) implement (core.plugin.builtin.PythonFile attribute) (core.plugin.builtin.PythonModel attribute) (image.plugin.applet.StackViewer attribute) (image.plugin.interface.IImageInterfacePlugin attribute) (image.plugin.oalab.IImageCodecPlugin attribute) (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) (openalea.oalab.mimedata.plugin.MimeCodecPlugin attribute) (openalea.oalab.mimedata.plugin.QMimeCodecPlugin attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) (openalea.oalab.plugin.builtin.interface.OpenAleaLabInterfacePlugin attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.AbstractParadigmPlugin attribute) (openalea.oalab.plugin.builtin.oalab.project.Tutorial attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) (openalea.oalab.plugin.oalab.mimedata.IQMimeCodecPlugin attribute) implementation (core.plugin.plugin.IPlugin attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) (openalea.oalab.plugin.builtin.interface.OpenAleaLabInterfacePlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginBoolWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginStringWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinControlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinDataCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinModelCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.UrlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.PythonModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.RModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.TextualModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.VisualeaModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.project.Tutorial attribute) (openalea.oalab.testing.mimedata.SampleCustomDataCodecPlugin attribute) implementations() (core.plugin.instance.PluginInstanceManager method) import_file() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) import_lpy() (openalea.oalab.control.model_view.ControlView method) import_module() (in module core.factory_parser)

imread() (in module image.serial.basics) imsave() (in module image.serial.basics) IMutableEdgeGraph (class in core.graph.interface.graph) IMutableVertexGraph (class in core.graph.interface.graph) in_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) in_neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) in_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) in_ports() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) IncompatibleNodeError index() (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) InexistingVertex info() (in module core.logger) (in module image_wralea.spatial_image) init() (core.model.IModel method) (core.model.Model method) (core.pkgmanager.PackageManager method) (core.session.Session method) (in module openalea.oalab.notebook) (openalea.core.model.IModel method) (openalea.core.model.Model method) (openalea.core.pkgmanager.PackageManager method) (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) init_interpreter() (in module core.cli) initialise_from_model() (openalea.grapheditor.interfaces.IGraphListener method) (openalea.grapheditor.interfaces.IGraphViewElement method) initialise_graph_view() (openalea.grapheditor.interfaces.IGraphViewStrategies method) initialise_standard_metadata() (in module core.node) initialize() (image.gui.oalab.applet.ImageStackViewer method) (openalea.oalab.config.main.MainConfig method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) (openalea.oalab.plot2d.mplwidget.MplTabWidget method) (openalea.oalab.plugin.applet.IApplet method) (openalea.oalab.plugin.builtin.lab.fulllab.FullLab class method) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab class method) (openalea.oalab.project.projecteditor.ProjectEditorWidget method) (openalea.oalab.shell.shellwidget.ShellWidget method) InitNode (class in core.system.systemnodes) input_format (core.serialization.BGEOMLoader attribute) (core.serialization.BinaryLoader attribute) (core.serialization.CPickleLoader attribute) (core.serialization.GenericLoader attribute) (core.serialization.PythonLoader attribute) InputObj (class in openalea.oalab.model.parse) InputPort (class in core.node) inputs (class in core.factory_decorator) (image.plugin.algo.IImageFilteringPlugin attribute) inputs() (core.actor.IActor method) inputs_from_ns() (core.model.Model method) (openalea.core.model.Model method) inputs_info (openalea.oalab.model.visualea.VisualeaModel attribute) insert_from_mime_data() (openalea.oalab.drag_and_drop.DropHandler method) insert_parent() (core.graph.interface.treeconcept.MutableTreeConcept method) insert_sibling() (core.graph.interface.treeconcept.MutableTreeConcept method) insert_sibling_tree() (core.graph.interface.treeconcept.EditableTreeConcept method) insertCompletion() (openalea.oalab.editor.text_editor.TextEditor method) install() (in module oalab_postinstall) instance() (core.plugin.instance.PluginInstanceManager method) (openalea.oalab.service.applet.Applet class method) instances() (core.plugin.instance.PluginInstanceManager method) (openalea.oalab.service.applet.Applet class method) instantiate() (core.compositenode.CompositeNodeFactory method) (core.data.DataFactory method) (core.factory.AbstractFactory method) (core.manager.GenericManager method) (core.node.AbstractFactory method) (core.node.NodeFactory method) (core.plugin.manager.PluginManager method) (core.project.manager.ProjectManager method) (openalea.core.plugin.manager.PluginManager method) (openalea.oalab.model.visualea.ModelNodeFactory method) instantiate_node() (core.compositenode.CompositeNodeFactory method) instantiate_widget() (core.compositenode.CompositeNodeFactory method) (core.data.DataFactory method) (core.node.AbstractFactory method) (core.node.NodeFactory method) (openalea.oalab.model.visualea.ModelNodeFactory method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.python.PythonModelController method) (openalea.oalab.paradigm.textual.TextualModelController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) InstantiationError InteractiveScalableLabel (class in image_wralea.gui.pick_color_widget) interface (core.control.control.Control attribute) interface_class() (in module core.service.interface) interface_label() (in module core.service.interface) interface_name() (in module core.service.interface) interfaces (core.plugin.interface.IPluginInterface attribute) InterfaceWidgetMap (class in core.interface) internal_data() (core.interface.IInterfaceWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) InterpolationError InterpolationLoopError Interpreter (class in core.interpreter.python) (in module core.interpreter.ipython) interpreter() (in module core.service.ipython) IntRangeWidgetSelector (class in openalea.oalab.control.selector) IntWidgetSelector (class in openalea.oalab.control.selector) invalidate() (core.compositenode.CompositeNode method) (core.node.AbstractNode method) (core.node.Node method) InvalidEdge, [1] InvalidGraph InvalidVertex, [1] inverse_matrix() (in module image.registration.matrix) invert_z_axis() (image.spatial_image.SpatialImage method) IParadigmApplet (class in openalea.oalab.plugin.oalab.paradigm) IPlugin (class in core.plugin.plugin) IPluginApplet (class in openalea.oalab.plugin.applet) IPluginInterface (class in core.plugin.interface) IPortGraph (class in core.graph.interface.port_graph) IPropertyGraph (class in core.graph.interface.property_graph) IPythonInProcessInterpreter (class in core.interpreter.ipython) IPythonLab (class in openalea.oalab.plugin.builtin.lab.minilab) IQMimeCodec (class in openalea.oalab.plugin.oalab.mimedata) IQMimeCodecPlugin (class in openalea.oalab.plugin.oalab.mimedata) IQMimeDecoder (class in openalea.oalab.plugin.oalab.mimedata) IQMimeEncoder (class in openalea.oalab.plugin.oalab.mimedata) IRGBColor (class in core.interface) is2D() (in module image.spatial_image) is_cn() (in module core.pm_extend) is_compatible() (openalea.oalab.mimedata.manager.MimeCodecManager method) is_composite_node() (core.compositenode.CompositeNodeFactory method) (core.node.AbstractFactory method) is_connectable() (openalea.grapheditor.interfaces.IGraphListener method) is_data() (core.data.DataFactory method) (core.node.AbstractFactory method) (in module core.pm_extend) is_deprecated_event() (core.node.Node static method) is_directory() (core.package.Package method) (openalea.core.package.Package method) is_editable() (core.package.Package method) (core.package.UserPackage method) (openalea.core.package.Package method) (openalea.core.package.UserPackage method) is_hidden() (core.node.InputPort method) is_in_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) is_input() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) is_leaf() (core.graph.interface.treeconcept.RootedTreeConcept method) is_legal_connection() (openalea.grapheditor.base.GraphAdapterBase method) is_node() (core.node.AbstractFactory method) (core.node.NodeFactory method) (in module core.pm_extend) is_operator() (core.algo.dataflow_evaluation.SciFlowareEvaluation static method) is_out_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) is_output() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) is_port_hidden() (core.node.Node method) is_protected() (in module core.pkgdict) is_python_string() (openalea.oalab.shell.shell.SyntaxColor method) is_real_package() (core.pkgmanager.PseudoPackage method) (openalea.core.pkgmanager.PseudoPackage method) is_same_data() (core.data.Data method) is_stopped() (core.algo.dataflow_evaluation.AbstractEvaluation method) (core.algo.dataflow_evaluation.BrutEvaluation method) (core.algo.dataflow_evaluation.DiscreteTimeEvaluation method) (core.algo.dataflow_evaluation.GeneratorEvaluation method) (core.algo.dataflow_evaluation.ToScriptEvaluation method) is_valid() (core.data.DataFactory method) (core.factory.AbstractFactory method) (core.graph.graph.Graph method) (core.graph.interface.graph.IGraph method) (core.graph.interface.graphconcept.GraphConcept method) (core.node.AbstractFactory method) (openalea.oalab.paradigm.creator.ParadigmInfoSelector method) is_vertex_protected() (openalea.grapheditor.base.GraphAdapterBase method) isabs() (core.path.path method) isatty() (openalea.oalab.shell.shell.PyCutExt method) ISaver (class in core.serialization) isdir() (core.path.path method) ISequence (class in core.interface) ISerializer (class in core.serialization) isfile() (core.path.path method) ISlice (class in core.interface) islink() (core.path.path method) ismount() (core.path.path method) isNoneAsStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) isNoneAsStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) isSelfStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) isSelfStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) isSysStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) isSysStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) IStr (class in core.interface) Item (class in core.traitsui) item() (core.manager.GenericManager method) (openalea.oalab.manager.explorer.ManagerExplorer method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) item_added (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) item_changed (openalea.oalab.manager.explorer.ManagerExplorerView attribute) item_clicked (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) item_compare() (in module openalea.visualea.node_treeview) item_double_clicked (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) item_focus_change() (openalea.oalab.paradigm.visualea.VisualeaModelController method) item_removed (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) item_selected (openalea.oalab.manager.selector.ManagerItemSelector attribute) items() (core.manager.GenericManager method) (core.pkgmanager.PackageManager method) (core.project.project.Project method) (openalea.core.pkgmanager.PackageManager method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) iter_groups() (in module core.plugin.plugin) iter_handlers() (core.logger.LoggerOffice method) iter_loggers() (core.logger.LoggerOffice method) iter_plugins() (in module core.plugin.plugin) iter_public_values() (core.pkgdict.PackageDict method) iteritems() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) iterkeys() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) IterNode (class in core.system.systemnodes) itervalues() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) IterWithDelayNode (class in core.system.systemnodes) ITextStr (class in core.interface) ITuple (class in core.interface) ITuple3 (class in core.interface) IVertexListGraph (class in core.graph.interface.graph) IWidgetMetaClass (class in core.interface) IWidgetSelector (class in openalea.oalab.plugin.oalab.control)

J

joinpath (core.path.path attribute)

JSONCNFactoryWriter (class in core.compositenode)

K

kargs() (core.customexception.CustomException method) keyPressEvent() (openalea.oalab.editor.text_editor.TextEditor method) (openalea.oalab.shell.shell.PyCutExt method) keys() (core.metadatadict.MetaDataDict method) (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) KEYWORD_ONLY (core.funcsigs.Parameter attribute)

keywords (openalea.oalab.shell.shell.SyntaxColor attribute) kind (core.funcsigs.Parameter attribute) kwargs (core.funcsigs.BoundArguments attribute)

L

label (core.control.control.Control attribute) (core.plugin.plugin.IPlugin attribute) (image.plugin.applet.StackViewer attribute) (openalea.oalab.plugin.builtin.applet.ContextualMenu attribute) (openalea.oalab.plugin.builtin.applet.ControlManager attribute) (openalea.oalab.plugin.builtin.applet.EditorManager attribute) (openalea.oalab.plugin.builtin.applet.FileBrowser attribute) (openalea.oalab.plugin.builtin.applet.HelpWidget attribute) (openalea.oalab.plugin.builtin.applet.HistoryWidget attribute) (openalea.oalab.plugin.builtin.applet.MplFigureWidget attribute) (openalea.oalab.plugin.builtin.applet.MplTabWidget attribute) (openalea.oalab.plugin.builtin.applet.PkgManagerWidget attribute) (openalea.oalab.plugin.builtin.applet.ProjectManager attribute) (openalea.oalab.plugin.builtin.applet.ShellWidget attribute) (openalea.oalab.plugin.builtin.applet.SplitterApplet attribute) (openalea.oalab.plugin.builtin.applet.WorldControl attribute) (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) (openalea.oalab.plugin.builtin.lab.fulllab.FullLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.project.Tutorial attribute) (openalea.oalab.plugin.lab.ILab attribute) label() (in module core.service.introspection) LambdaEvaluation (class in core.algo.dataflow_evaluation) LambdaVar (class in core.system.systemnodes) last_child() (core.graph.interface.treeconcept.OrderedTreeConcept method) launch_lab() (in module openalea.oalab.main) layout (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) (openalea.oalab.plugin.lab.ILab attribute) layout() (in module core.vlab) lazy (core.node.Node attribute) lazy_image_or_path() (in module image.serial.basics) lena() (in module image_wralea.image) LIGHT_STYLE (openalea.oalab.editor.pyeditor.editor.PyCodeEditor attribute) lines() (core.path.path method) link() (core.path.path method) links (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) list_colormaps() (in module openalea.oalab.colormap.colormap_def) list_plugins() (in module core.plugin.formatting.text) listdir() (core.path.path method) liste() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) load() (core.project.manager.ProjectManager method) (core.project.serialization.ProjectLoader method) (core.serialization.AbstractLoader method) (core.serialization.BGEOMLoader method) (core.serialization.BinaryLoader method) (core.serialization.CPickleLoader method) (core.serialization.GenericLoader method) (core.serialization.ILoader method) (core.serialization.PythonLoader method) (core.session.Session method) (in module core.service.serialization) (in module image.serial.basics) load_ad_hoc_data() (core.compositenode.CompositeNodeFactory method)

load_colormaps() (in module openalea.oalab.colormap.colormap_def) load_controls() (openalea.oalab.control.model_view.ControlView method) load_default() (core.project.manager.ProjectManager method) load_directory() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) load_items() (core.manager.GenericManager method) (core.project.manager.ProjectManager method) load_local() (in module image.gui.animator) (in module image_wralea.gui.pick_color_widget) (in module image_wralea.gui.select_box_widget) load_module() (core.session.Session method) load_package_manager() (in module core.alea) load_points() (image.gui.point_selection.PointSelection method) load_settings() (core.project.manager.ProjectManager method) local_id() (core.dataflow.DataFlow method) lock_position() (openalea.grapheditor.interfaces.IGraphViewVertex method) log() (in module core.logger) Logger (class in core.pkgmanager) (class in openalea.core.pkgmanager) (class in openalea.oalab.plugin.builtin.applet) logger (openalea.oalab.config.gui.MainWindowConfig attribute) LoggerOffice (class in core.logger) logicalnot() (in module image.algo.basic) loop_changed() (image_wralea.gui.animator_widget.AnimatorWidget method) lower() (in module core.pkgdict) LOWER_CASE (core.plugin.plugin.PluginDef attribute) lstat() (core.path.path method)

M

main() (in module core.alea) (in module core.project.manager) (in module openalea.oalab.editor.text_editor) (in module openalea.oalab.main) (in module openalea.oalab.project.creator) (in module openalea.oalab.project.explorer) (in module openalea.oalab.project.preview) (in module openalea.oalab.shell.shell) (in module openalea.oalab.shell.shellwidget) MainConfig (class in openalea.oalab.config.main) mainMenu() (in module openalea.oalab.paradigm.visualea) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) MainWindow (class in openalea.visualea.mainwindow) MainWindowConfig (class in openalea.oalab.config.gui) make_default_logger() (core.logger.LoggerOffice method) make_metaclass() (in module core.metaclass) makedirs() (core.path.path method) makedirs_p() (core.path.path method) ManagerExplorer (class in openalea.oalab.manager.explorer) ManagerExplorerModel (class in openalea.oalab.manager.explorer) ManagerExplorerView (class in openalea.oalab.manager.explorer) ManagerItemSelector (class in openalea.oalab.manager.selector) mantissa() (in module image.serial.tif) Margin (class in openalea.oalab.editor.line_number) matrix_real2voxels() (in module image.registration.matrix) matrix_voxels2real() (in module image.registration.matrix) max() (core.graph.interface.latticeconcept.ScaleLattice method) menu (openalea.oalab.config.gui.MainWindowConfig attribute) menu_actions() (openalea.oalab.paradigm.container.ModelEditorApplet method) (openalea.oalab.plugin.applet.IApplet method) menu_names (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) menus() (openalea.oalab.paradigm.container.ModelEditorApplet method) (openalea.oalab.plugin.applet.IApplet method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) message (core.customexception.CustomException attribute) (core.project.project.ErrorItemExistsInProject attribute) (openalea.oalab.mimedata.exception.MimeConversionError attribute) metadata() (openalea.oalab.project.creator.CreateProjectWidget method) MetaDataDict (class in core.metadatadict) mime_types() (openalea.oalab.drag_and_drop.DragHandler method) MimeCodec (class in openalea.oalab.mimedata.codec) MimeCodecManager (class in openalea.oalab.mimedata.manager) MimeCodecPlugin (class in openalea.oalab.mimedata.plugin) MimeConversionError mimeData() (openalea.oalab.control.model_view.ControlModel method) (openalea.oalab.project.qtmodel.ProjectModel method) (openalea.oalab.testing.drag_and_drop.DragModel method) mimetype (core.compositenode.CompositeNode attribute) (core.compositenode.CompositeNodeFactory attribute) (core.data.Data attribute) (core.data.PythonFile attribute) (core.factory.AbstractFactory attribute) (core.model.IModel attribute) (core.model.PythonModel attribute) (core.node.AbstractFactory attribute) (core.node.AbstractNode attribute) (core.package.Package attribute) (core.pkgmanager.PseudoGroup attribute) (core.plugin.builtin.PythonFile attribute) (core.plugin.builtin.PythonModel attribute) (openalea.core.model.IModel attribute) (openalea.core.model.PythonModel attribute) (openalea.core.package.Package attribute) (openalea.core.pkgmanager.PseudoGroup attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.RModel attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaModel attribute) MimeType() (in module core.service.data) mimetype() (openalea.oalab.drag_and_drop.DropSelectorMenu method) (openalea.oalab.drag_and_drop.DropSelectorWidget method) mimetype_data (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.PythonModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.RModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.TextualModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.VisualeaModelGUI attribute) mimetype_desc (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinControlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinDataCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinModelCodecPlugin attribute) (openalea.oalab.testing.mimedata.SampleCustomDataCodecPlugin attribute) mimetype_model (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.PythonModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.RModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.TextualModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.VisualeaModelGUI attribute) mimetypes (openalea.oalab.editor.pyeditor.editor.PyCodeEditor attribute) min() (core.graph.interface.latticeconcept.ScaleLattice method) MiniLab (class in openalea.oalab.plugin.builtin.lab.minilab) missing_dependencies() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) MissingInterpolationOption mkdir() (core.path.path method)

mkdir_p() (core.path.path method) MODE_COPY (core.project.project.Project attribute) MODE_LINK (core.project.project.Project attribute) Model (class in core.model) (class in openalea.core.model) model (openalea.oalab.paradigm.controller.ParadigmController attribute) model() (in module core.service.run) ModelClass() (in module core.service.model) ModelEditorApplet (class in openalea.oalab.paradigm.container) ModelFactory() (in module core.service.model) ModelNode (class in openalea.oalab.model.visualea) ModelNodeFactory (class in openalea.oalab.model.visualea) module (core.path.path attribute) (core.plugin.plugin.IPlugin attribute) modulename (core.plugin.plugin.IPlugin attribute) monitor_file() (core.data.DataNode method) monkey_patch_instantiate_node() (in module openalea.oalab.model.visualea) mouse_click() (image_wralea.gui.pick_color_widget.PickColorWidget method) mouse_move() (image_wralea.gui.pick_color_widget.PickColorWidget method) mouse_moved() (image.gui.point_selection.PointSelection method) mouse_pressed() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) mouseDoubleClickEvent() (image_wralea.gui.pick_color_widget.InteractiveScalableLabel method) (openalea.oalab.package.treeview.OALabSearchView method) (openalea.oalab.package.treeview.OALabTreeView method) (openalea.visualea.node_treeview.NodeFactoryView method) mouseMoveEvent() (image.gui.pixmap_view.ScalableGraphicsView method) (image.gui.pixmap_view.ScalableLabel method) (image_wralea.gui.pick_color_widget.InteractiveScalableLabel method) (image_wralea.gui.select_box_widget.SelectBoxWidget method) mousePressEvent() (image.gui.pixmap_view.ScalableGraphicsView method) (image.gui.pixmap_view.ScalableLabel method) (image_wralea.gui.pick_color_widget.InteractiveScalableLabel method) (image_wralea.gui.select_box_widget.SelectBoxWidget method) (openalea.oalab.editor.line_number.Margin method) (openalea.oalab.shell.shell.PyCutExt method) mouseReleaseEvent() (image_wralea.gui.pick_color_widget.InteractiveScalableLabel method) (image_wralea.gui.select_box_widget.SelectBoxWidget method) move() (core.data.Data method) (core.path.path method) (core.project.project.Project method) move_package() (openalea.visualea.node_treeview.NodeFactoryView method) moveCursor() (openalea.oalab.shell.shell.PyCutExt method) MplCanvas (class in openalea.oalab.plot2d.figurewidget) MplFigure (class in openalea.oalab.plot2d.figurewidget) MplFigureWidget (class in openalea.oalab.plot2d.figurewidget) (class in openalea.oalab.plugin.builtin.applet) MplTabWidget (class in openalea.oalab.plot2d.mplwidget) (class in openalea.oalab.plugin.builtin.applet) mtime (core.path.path attribute) MultipleRedirection (class in openalea.oalab.shell.streamredirection) multipleStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) multipleStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) MultiscaleContainer (class in core.graph.interface.latticeconcept) MultiscaleTree (class in core.graph.interface.latticeconcept) MutableEdgeGraphConcept (class in core.graph.interface.graphconcept) MutableMultiscaleContainer (class in core.graph.interface.latticeconcept) MutableMultiscaleTree (class in core.graph.interface.latticeconcept) MutableScaleLattice (class in core.graph.interface.latticeconcept) MutableTreeConcept (class in core.graph.interface.treeconcept) MutableVertexGraphConcept (class in core.graph.interface.graphconcept)

N

name (core.control.control.Control attribute) (core.data.Data attribute) (core.funcsigs.Parameter attribute) (core.path.path attribute) (core.plugin.plugin.IPlugin attribute) (core.project.project.Project attribute) (core.world.world.WorldObject attribute) (image.plugin.algo.IImageFilteringPlugin attribute) (image.plugin.applet.StackViewer attribute) (openalea.oalab.paradigm.container.ParadigmContainer attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.plugin.builtin.applet.MplFigureWidget attribute) (openalea.oalab.plugin.builtin.applet.MplTabWidget attribute) (openalea.oalab.plugin.builtin.lab.default.DefaultLab attribute) (openalea.oalab.plugin.builtin.lab.fulllab.FullLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.IPythonLab attribute) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.PythonModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.RModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.TextualModelGUI attribute) (openalea.oalab.plugin.builtin.oalab.paradigm.VisualeaModelGUI attribute) (openalea.oalab.plugin.lab.ILab attribute) (openalea.oalab.plugin.oalab.paradigm.IParadigmApplet attribute) name() (core.script_library.ScriptLibrary method) (in module core.service.introspection) (openalea.oalab.paradigm.creator.ParadigmInfoSelector method) (openalea.oalab.project.dialog.SelectCategory method) name2program (core.vlab.VlabObject attribute) name_conversion (openalea.oalab.plugin.builtin.applet.AppletPlugin attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) namebase (core.path.path attribute) NameControlDelegate (class in openalea.oalab.control.model_view) namespace() (core.control.manager.ControlContainer method) (in module core.service.run) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) nb_children() (core.graph.interface.treeconcept.RootedTreeConcept method) nb_coarser() (core.graph.interface.latticeconcept.ScaleLattice method) nb_components() (core.graph.interface.latticeconcept.MultiscaleContainer method) nb_connections() (core.dataflow.DataFlow method) nb_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) nb_elements() (core.graph.interface.latticeconcept.Container method) nb_finer() (core.graph.interface.latticeconcept.ScaleLattice method) nb_frame_changed() (image.gui.animator.FrameAnimator method) nb_in_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) nb_in_neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) nb_neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) nb_out_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) nb_out_neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) nb_public_values() (core.pkgdict.PackageDict method) nb_scales() (core.graph.interface.latticeconcept.ScaleLattice method) nb_siblings() (core.graph.interface.treeconcept.RootedTreeConcept method) nb_slices() (image.gui.pixmap_view.PixmapStackView method) nb_vertices() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) NestingError new() (core.pkgmanager.PseudoGroup method) (core.pkgmanager.PseudoPackage method) (core.plugin.instance.PluginInstanceManager method) (openalea.core.pkgmanager.PseudoGroup method) (openalea.core.pkgmanager.PseudoPackage method) (openalea.oalab.service.applet.Applet class method) new_contextual_paradigm() (openalea.oalab.project.projecteditor.ProjectEditorView method) new_control() (in module core.service.control) (openalea.oalab.control.model_view.ControlView method) new_data() (openalea.visualea.mainwindow.MainWindow method) new_figure() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) new_figure_manager_given_figure() (in module openalea.oalab.plot2d.figurewidget) (in module openalea.oalab.plot2d.mplwidget) new_graph() (openalea.visualea.mainwindow.MainWindow method) new_interface() (in module core.service.interface) new_name() (openalea.oalab.project.dialog.RenameModel method)

new_package() (openalea.visualea.mainwindow.MainWindow method) new_paradigm() (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.project.projecteditor.ProjectEditorView method) new_plugin() (in module openalea.oalab.plugin.builtin.oalab.visualea_control) new_project() (in module openalea.oalab.project.dialog) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) new_python_node() (openalea.visualea.mainwindow.MainWindow method) new_session() (openalea.visualea.mainwindow.MainWindow method) new_vertex() (openalea.grapheditor.base.GraphAdapterBase method) new_workspace() (openalea.visualea.mainwindow.MainWindow method) newline() (core.codegen.SourceGenerator method) next_sibling() (core.graph.interface.treeconcept.OrderedTreeConcept method) next_step() (core.algo.dataflow_evaluation.DiscreteTimeEvaluation method) Node (class in core.node) node() (core.compositenode.CompositeNode method) node_exec() (core.algo.dataflow_evaluation.PrintProvenance method) (core.algo.dataflow_evaluation.Provenance method) node_factory() (in module core.plugin.node) NodeFactory (class in core.node) nodefactory_template (core.node.PyNodeFactoryWriter attribute) (openalea.oalab.model.visualea.PyModelNodeFactoryWriter attribute) NodeFactoryTreeView (class in openalea.visualea.node_treeview) NodeFactoryView (class in openalea.visualea.node_treeview) nodes() (in module core.pm_extend) noneAsStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) noneAsStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) NoneOutput (class in openalea.oalab.shell.streamredirection) normcase() (core.path.path method) normpath() (core.path.path method) notebook_editor() (in module openalea.oalab.service.notebook_control) NotebookControlWidget (class in openalea.oalab.service.notebook_control) notify() (core.compositenode.ContinuousEvalListener method) (core.control.manager.ControlContainer method) (core.control.manager.Follower method) (core.interface.IInterfaceWidget method) (core.project.manager.ProjectManager method) (core.unittest_tools.EventTracker method) (core.world.world.World method) (image.gui.oalab.applet.ImageStackViewer method) (image_wralea.gui.animator_widget.AnimatorWidget method) (image_wralea.gui.pick_color_widget.PickColorWidget method) (image_wralea.gui.select_box_widget.SelectBoxWidget method) (image_wralea.image_interface_widget.IImageWidget method) (openalea.grapheditor.interfaces.IGraphViewAnnotation method) (openalea.grapheditor.interfaces.IGraphViewEdge method) (openalea.grapheditor.interfaces.IGraphViewElement method) (openalea.oalab.control.model_view.ControlModel method) (openalea.oalab.control.qcontainer.QControlContainer method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.oalab_wralea.oalabnode.Control method) (openalea.visualea.mainwindow.MainWindow method) (openalea.visualea.node_treeview.DataPoolListView method) notify_change() (core.control.control.Control method) notify_decorator() (in module core.datapool) notify_listeners() (core.node.Node method) (core.world.world.WorldObject method) notify_vertex_addition() (core.compositenode.CompositeNode method) notify_vertex_removal() (core.compositenode.CompositeNode method) null_vector_field_like() (in module image.spatial_image) NUM_THREAD (core.threadmanager.ThreadManager attribute) numpy_4x4_mat_to_c_array() (in module image.registration.matrix)

O

oalab_postinstall (module) OALabSearchView (class in openalea.oalab.package.treeview) OALabTreeView (class in openalea.oalab.package.treeview) obj (core.world.world.WorldObject attribute) obj_icon_path() (in module core.formatting.util) objectname (core.plugin.plugin.IPlugin attribute) old_name() (openalea.oalab.project.dialog.RenameModel method) on_controls_selected() (openalea.oalab.control.manager.ControlManagerWidget method) on_current_tab_changed() (openalea.oalab.paradigm.container.ModelEditorApplet method) on_package_manager_focus_change() (openalea.oalab.package.widgets.PackageCategorieViewWidget method), [1] (openalea.oalab.package.widgets.PackageSearchWidget method), [1] (openalea.oalab.package.widgets.PackageViewWidget method), [1] (openalea.visualea.mainwindow.MainWindow method) on_scene_focus_change() (openalea.visualea.mainwindow.MainWindow method) on_session_started() (openalea.visualea.mainwindow.MainWindow method) on_user_edit() (openalea.oalab.control.editor.ControlEditor method) on_value_changed() (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) on_widget_changed() (openalea.oalab.control.editor.ControlEditor method) on_widget_value_changed() (openalea.oalab.service.notebook_control.NotebookControlWidget method) onRowsInserted() (openalea.oalab.control.model_view.ControlView method) open() (core.path.path method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) open_compositenode() (openalea.visualea.mainwindow.MainWindow method) open_data() (openalea.oalab.paradigm.container.ParadigmContainer method) open_file() (openalea.oalab.paradigm.container.ParadigmContainer method) open_node() (openalea.visualea.node_treeview.NodeFactoryView method) open_preferences() (openalea.visualea.mainwindow.MainWindow method) open_project() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) open_python_console() (openalea.visualea.mainwindow.MainWindow method) open_session() (openalea.visualea.mainwindow.MainWindow method) open_widget_tab() (openalea.visualea.mainwindow.MainWindow method) openalea (module) openalea.core.model (module), [1] openalea.core.package (module) openalea.core.pkgmanager (module) openalea.core.plugin (module) openalea.core.plugin.applet (module) openalea.core.plugin.interface (module) openalea.core.plugin.manager (module) openalea.core.project (module) openalea.core.project.manager (module) openalea.core.project.project (module) openalea.grapheditor.base (module) openalea.grapheditor.interfaces (module) openalea.image.plugin (module) openalea.oalab (module) openalea.oalab.about (module) openalea.oalab.cli (module) openalea.oalab.cli.parser (module) openalea.oalab.colormap (module) openalea.oalab.colormap.colormap_def (module) openalea.oalab.colormap.colormap_utils (module) openalea.oalab.colormap.colormaps (module) openalea.oalab.config (module) openalea.oalab.config.gui (module) openalea.oalab.config.main (module) openalea.oalab.config.template (module) openalea.oalab.control (module) openalea.oalab.control.editor (module) openalea.oalab.control.manager (module) openalea.oalab.control.model_view (module) openalea.oalab.control.qcontainer (module) openalea.oalab.control.selector (module) openalea.oalab.control.widget (module) openalea.oalab.drag_and_drop (module) openalea.oalab.editor (module) openalea.oalab.editor.completion (module) openalea.oalab.editor.goto (module) openalea.oalab.editor.highlight (module) openalea.oalab.editor.line_number (module) openalea.oalab.editor.plaintext_editor (module) openalea.oalab.editor.pyeditor (module) openalea.oalab.editor.pyeditor.editor (module) openalea.oalab.editor.search (module) openalea.oalab.editor.text_editor (module) openalea.oalab.fspm (module) openalea.oalab.interface (module) openalea.oalab.main (module) openalea.oalab.manager (module) openalea.oalab.manager.explorer (module) openalea.oalab.manager.selector (module) openalea.oalab.metainfo (module) openalea.oalab.mimedata (module) openalea.oalab.mimedata.builtin (module) openalea.oalab.mimedata.codec (module) openalea.oalab.mimedata.exception (module) openalea.oalab.mimedata.manager (module) openalea.oalab.mimedata.plugin (module) openalea.oalab.mimedata.qcodec (module) openalea.oalab.model (module) openalea.oalab.model.parse (module) openalea.oalab.model.r (module) openalea.oalab.model.textual (module) openalea.oalab.model.visualea (module), [1] openalea.oalab.notebook (module) openalea.oalab.package (module) openalea.oalab.package.manager (module)

openalea.oalab.package.treeview (module) openalea.oalab.package.widgets (module), [1] openalea.oalab.painter (module) openalea.oalab.paradigm (module) openalea.oalab.paradigm.container (module) openalea.oalab.paradigm.controller (module) openalea.oalab.paradigm.creator (module) openalea.oalab.paradigm.python (module) openalea.oalab.paradigm.r (module) openalea.oalab.paradigm.textual (module) openalea.oalab.paradigm.visualea (module) openalea.oalab.plot2d (module) openalea.oalab.plot2d.figurewidget (module) openalea.oalab.plot2d.mplwidget (module) openalea.oalab.plugin (module) openalea.oalab.plugin.applet (module) openalea.oalab.plugin.builtin (module) openalea.oalab.plugin.builtin.applet (module) openalea.oalab.plugin.builtin.core (module) openalea.oalab.plugin.builtin.interface (module) openalea.oalab.plugin.builtin.lab (module) openalea.oalab.plugin.builtin.lab.default (module) openalea.oalab.plugin.builtin.lab.fulllab (module) openalea.oalab.plugin.builtin.lab.minilab (module) openalea.oalab.plugin.builtin.oalab (module) openalea.oalab.plugin.builtin.oalab.control (module) openalea.oalab.plugin.builtin.oalab.mimedata (module) openalea.oalab.plugin.builtin.oalab.paradigm (module) openalea.oalab.plugin.builtin.oalab.project (module) openalea.oalab.plugin.builtin.oalab.visualea_control (module) openalea.oalab.plugin.lab (module) openalea.oalab.plugin.oalab (module) openalea.oalab.plugin.oalab.control (module), [1] openalea.oalab.plugin.oalab.mimedata (module) openalea.oalab.plugin.oalab.paradigm (module) openalea.oalab.pluginwidget (module) openalea.oalab.pluginwidget.explorer (module) openalea.oalab.project (module) openalea.oalab.project.creator (module) openalea.oalab.project.dialog (module) openalea.oalab.project.explorer (module) openalea.oalab.project.preview (module) openalea.oalab.project.projectbrowser (module) openalea.oalab.project.projecteditor (module) openalea.oalab.project.qtmodel (module) openalea.oalab.project.symlink (module) openalea.oalab.service (module) openalea.oalab.service.applet (module) openalea.oalab.service.control (module) openalea.oalab.service.drag_and_drop (module) openalea.oalab.service.geometry (module) openalea.oalab.service.help (module) openalea.oalab.service.history (module) openalea.oalab.service.mimedata (module) openalea.oalab.service.notebook_control (module) openalea.oalab.service.paradigm (module) openalea.oalab.service.plot (module) openalea.oalab.service.qt_control (module) openalea.oalab.service.r2py (module) openalea.oalab.shell (module) openalea.oalab.shell.shell (module) openalea.oalab.shell.shellwidget (module) openalea.oalab.shell.streamredirection (module) openalea.oalab.testing (module) openalea.oalab.testing.applet (module) openalea.oalab.testing.drag_and_drop (module) openalea.oalab.testing.mimedata (module) openalea.oalab.utils (module) openalea.oalab_wralea (module) openalea.oalab_wralea.oalabnode (module) openalea.oalab_wralea.tutorial (module) openalea.visualea.mainwindow (module) openalea.visualea.node_treeview (module) OpenAleaControlWidget (class in openalea.oalab.control.widget) OpenAleaControlWidgetFactory() (in module openalea.oalab.plugin.builtin.oalab.visualea_control) OpenAleaLabCredits (class in openalea.oalab.about) OpenAleaLabInterfacePlugin (class in openalea.oalab.plugin.builtin.interface) OpenAleaLabSummary (class in openalea.oalab.about) options (core.project.serialization.ProjectLoader attribute) (core.project.serialization.ProjectSaver attribute) (core.serialization.IDeserializer attribute) (core.serialization.ILoader attribute) (core.serialization.ISaver attribute) (core.serialization.ISerializer attribute) OrderedTreeConcept (class in core.graph.interface.treeconcept) out_edges() (core.graph.graph.Graph method) (core.graph.interface.graph.IEdgeListGraph method) (core.graph.interface.graphconcept.EdgeListGraphConcept method) out_neighbors() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) out_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) out_ports() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) output() (core.actor.IActor method) (core.node.Node method) output_format (core.serialization.BGEOMSaver attribute) (core.serialization.BinarySaver attribute) (core.serialization.CPickleSaver attribute) (core.serialization.GenericTextSaver attribute) output_from_ns() (core.model.Model method) (openalea.core.model.Model method) OutputObj (class in openalea.oalab.model.parse) OutputPort (class in core.node) outputs (class in core.factory_decorator) outputs() (core.actor.IActor method) outputs_info (openalea.oalab.model.visualea.VisualeaModel attribute) owner (core.path.path attribute)

P

Package (class in core.package) (class in openalea.core.package) package (core.node.AbstractFactory attribute) (openalea.oalab.model.visualea.ModelNodeFactory attribute) package_dependencies() (in module core.pm_extend) packagecategories (openalea.oalab.config.gui.MainWindowConfig attribute) PackageCategorieViewWidget (class in openalea.oalab.package.widgets), [1] PackageData (class in core.data) PackageDict (class in core.pkgdict) PackageManager (class in core.pkgmanager) (class in openalea.core.pkgmanager) PackageManagerCategory (class in core.category) PackageManagerTreeView (class in openalea.oalab.package.widgets), [1] packages (openalea.oalab.config.gui.MainWindowConfig attribute) packagesearch (openalea.oalab.config.gui.MainWindowConfig attribute) PackageSearchWidget (class in openalea.oalab.package.widgets), [1] PackageViewWidget (class in openalea.oalab.package.widgets), [1] paint (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) paint() (image.gui.oalab.control.IImageSelector class method) (openalea.oalab.control.model_view.ValueControlDelegate method) (openalea.oalab.control.selector.ColormapWidgetSelector class method) (openalea.oalab.plugin.oalab.control.IWidgetSelector class method) paint_control() (openalea.oalab.painter.AbstractPainter method) (openalea.oalab.painter.PainterInterfaceObject method) paint_data() (image.gui.oalab.control.IImagePainter method) (openalea.oalab.painter.AbstractPainter method) (openalea.oalab.painter.PainterColormap method) (openalea.oalab.painter.PainterInterfaceObject method) PainterColormap (class in openalea.oalab.painter) PainterInterfaceObject (class in openalea.oalab.painter) paintEvent() (image_wralea.gui.select_box_widget.SelectBoxWidget method) (openalea.oalab.editor.line_number.Margin method) palette() (image.gui.pixmap_view.PixmapView method) palette_factory() (in module image.gui.palette) palette_name_changed() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) PanedMenu (class in openalea.oalab.gui.menu) paradigm_clicked (openalea.oalab.paradigm.creator.ParadigmCreator attribute) paradigm_controller() (in module openalea.oalab.service.paradigm) paradigm_controller_class() (in module openalea.oalab.service.paradigm) ParadigmContainer (class in openalea.oalab.paradigm.container) ParadigmController (class in openalea.oalab.paradigm.controller) ParadigmCreator (class in openalea.oalab.paradigm.creator) ParadigmInfoSelector (class in openalea.oalab.paradigm.creator) Parameter (class in core.funcsigs) parameters (core.funcsigs.Signature attribute) parent (core.path.path attribute) parent() (core.graph.interface.treeconcept.RootedTreeConcept method) (openalea.visualea.node_treeview.PkgModel method) parse() (openalea.oalab.cli.parser.CommandLineParser method) parse_component() (in module core.alea) parse_doc() (in module openalea.oalab.model.parse) parse_docstring() (in module openalea.oalab.model.parse) parse_docstring_r() (in module openalea.oalab.model.parse) parse_function() (in module openalea.oalab.model.parse) parse_functions() (in module openalea.oalab.model.parse) parse_functions_r() (in module openalea.oalab.model.parse) parse_input_and_output() (in module openalea.oalab.model.parse) parse_lpy() (in module openalea.oalab.model.parse) parse_module() (in module core.factory_parser) ParseError paste() (core.compositenode.CompositeNodeFactory method) patch_ep_plugin() (core.plugin.manager.PluginManager method) (openalea.core.plugin.manager.PluginManager method) patch_item() (core.manager.GenericManager method) (core.plugin.manager.PluginManager method) (core.project.manager.ProjectManager method) (openalea.core.plugin.manager.PluginManager method) PatchedPyLogger (class in core.logger) path (class in core.path) (core.project.project.Project attribute) pathconf() (core.path.path method) pattern (core.data.Data attribute) (core.data.PythonFile attribute) (core.plugin.builtin.PythonFile attribute) (openalea.oalab.model.r.RFile attribute) (openalea.oalab.model.r.RModel attribute) (openalea.oalab.model.textual.TextualModel attribute) (openalea.oalab.model.visualea.VisualeaFile attribute) (openalea.oalab.model.visualea.VisualeaModel attribute) (openalea.oalab.paradigm.IModelController attribute) (openalea.oalab.paradigm.controller.ParadigmController attribute) (openalea.oalab.paradigm.python.PythonModelController attribute) (openalea.oalab.paradigm.r.RModelController attribute) (openalea.oalab.paradigm.textual.TextualModelController attribute) (openalea.oalab.paradigm.visualea.VisualeaModelController attribute) (openalea.oalab.plugin.builtin.core.RFile attribute) (openalea.oalab.plugin.builtin.core.VisualeaFile attribute) pause() (image.gui.animator.FrameAnimator method) pick_color() (in module image_wralea.gui.pick_color_widget) PickColorWidget (class in image_wralea.gui.pick_color_widget) picklable_object() (in module core.service.serialization) pixmap() (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) pixmap_coordinates() (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) (image.gui.pixmap_view.ScalableLabel method) pixmap_real_size() (image.gui.pixmap_view.PixmapView method) PixmapStackView (class in image.gui.pixmap_view) PixmapView (class in image.gui.pixmap_view) pkg_template (core.package.PyPackageWriter attribute) (openalea.core.package.PyPackageWriter attribute) PkgManagerWidget (class in openalea.oalab.plugin.builtin.applet) PkgModel (class in openalea.visualea.node_treeview) pkgname() (core.vlab.VlabObject method) PlainTextEdit (class in openalea.oalab.editor.plaintext_editor) PlainTextEditor (class in openalea.oalab.editor.plaintext_editor) play() (image.gui.animator.FrameAnimator method) Plugin (class in core.plugin.plugin) plugin (core.plugin.functor.PluginFunctor attribute) (in module openalea.oalab.plugin.builtin.oalab.visualea_control) plugin_doc() (in module core.plugin.functor) plugin_name() (in module core.plugin.plugin) PluginApplet (class in openalea.oalab.plugins.applets) PluginBoolWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control) PluginColormapWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control) PluginDef (class in core.plugin.plugin) PluginExplorer (class in openalea.oalab.pluginwidget.explorer) PluginFloatWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control) PluginFunctor (class in core.plugin.functor) PluginInstanceManager (class in core.plugin.instance) PluginIntRangeWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control) PluginIntWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control) PluginManager (class in core.plugin.manager) (class in openalea.core.plugin.manager) PluginStringWidgetSelector (class in openalea.oalab.plugin.builtin.oalab.control)

pm_dependencies() (in module core.pm_extend) point_selection() (in module image.gui.point_selection) (in module image_wralea.gui.point_selection_node) PointSelection (class in image.gui.point_selection) PoolDefault (class in core.system.systemnodes) PoolReader (class in core.system.systemnodes) PoolWriter (class in core.system.systemnodes) popitem() (core.scene.vplscene.VPLScene method) Port (class in core.dataflow) port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) port_edges() (core.graph.interface.port_graph.IPortGraph method) port_neighbors() (core.graph.interface.port_graph.IPortGraph method) PortError ports() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) position_changed() (openalea.grapheditor.interfaces.IGraphViewElement method) POSITIONAL_ONLY (core.funcsigs.Parameter attribute) POSITIONAL_OR_KEYWORD (core.funcsigs.Parameter attribute) possible_conv() (openalea.oalab.mimedata.manager.MimeCodecManager method) post_addition() (openalea.grapheditor.interfaces.IGraphListener method) post_order() (core.graph.interface.treeconcept.Visitor method) pprint_repr() (core.compositenode.PyCNFactoryWriter method) pre_order() (core.graph.interface.treeconcept.Visitor method) prepare_inputs() (in module openalea.oalab.model.parse) pretty_print() (in module core.formatting.util) Preview (class in openalea.oalab.pluginwidget.explorer) (class in openalea.oalab.project.preview) preview size previous_sibling() (core.graph.interface.treeconcept.OrderedTreeConcept method) print_log() (core.pkgmanager.Logger method) (openalea.core.pkgmanager.Logger method) print_score() (in module core.pm_extend) PrintProvenance (class in core.algo.dataflow_evaluation) PriorityEvaluation (class in core.algo.dataflow_evaluation) process_command() (core.vlab.VlabObject method) process_editor() (core.vlab.VlabObject method) (core.vlab.VlabObject2 method) process_files() (core.vlab.VlabObject method) (core.vlab.VlabObject2 method) process_obj (core.node.FuncNode attribute) (core.node.Node attribute) process_program() (core.vlab.VlabObject method) process_text() (core.vlab.VlabObject method) (core.vlab.VlabObject2 method) programs (core.vlab.VlabObject attribute) Project (class in core.project.project) project (openalea.oalab.config.gui.MainWindowConfig attribute) project() (openalea.oalab.project.creator.CreateProjectWidget method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) (openalea.oalab.project.qtmodel.ProjectModel method) project_closed (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) project_item() (in module core.service.project) project_manager (openalea.oalab.config.gui.MainWindowConfig attribute) project_open (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) ProjectBrowserView (class in openalea.oalab.project.projectbrowser) ProjectBrowserWidget (class in openalea.oalab.project.projectbrowser) projectdata() (openalea.oalab.project.qtmodel.ProjectModel method) projectdir (core.project.project.Project attribute) ProjectEditorView (class in openalea.oalab.project.projecteditor) ProjectEditorWidget (class in openalea.oalab.project.projecteditor) ProjectExplorer (class in openalea.oalab.project.explorer) ProjectLoader (class in core.project.serialization) ProjectManager (class in core.project.manager) (class in openalea.oalab.plugin.builtin.applet) ProjectModel (class in openalea.oalab.project.qtmodel) projects() (in module core.service.project) ProjectSaver (class in core.project.serialization) properties() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) PropertyError PropertyGraph (class in core.graph.property_graph) protected() (in module core.pkgdict) protocols (core.control.serialization.ControlLoader attribute) (core.control.serialization.ControlSaver attribute) (core.project.serialization.ProjectLoader attribute) (core.project.serialization.ProjectSaver attribute) (core.serialization.IDeserializer attribute) (core.serialization.ILoader attribute) (core.serialization.ISaver attribute) (core.serialization.ISerializer attribute) Provenance (class in core.algo.dataflow_evaluation) provenance() (in module core.algo.dataflow_evaluation) ProxySingleton (class in core.singleton) PseudoGroup (class in core.pkgmanager) (class in openalea.core.pkgmanager) PseudoPackage (class in core.pkgmanager) (class in openalea.core.pkgmanager) pts2transfo() (in module image.registration.registration) push() (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (openalea.oalab.shell.shellwidget.ShellWidget method) py2r() (in module openalea.oalab.service.r2py) PyCNFactoryWriter (class in core.compositenode) PyCodeEditor (class in openalea.oalab.editor.pyeditor.editor) PyCutExt (class in openalea.oalab.shell.shell) PyDataFactoryWriter (class in core.data) PygmentsBlockUserData (class in openalea.oalab.editor.highlight) PyModelNodeFactoryWriter (class in openalea.oalab.model.visualea) pyname() (in module openalea.oalab.mimedata.builtin) PyNodeFactoryWriter (class in core.node) PyPackageReader (class in core.package) (class in openalea.core.package) PyPackageReaderVlab (class in core.package) (class in openalea.core.package) PyPackageReaderWralea (class in core.package) (class in openalea.core.package) PyPackageWriter (class in core.package) (class in openalea.core.package) PythonFile (class in core.data) (class in core.plugin.builtin) PythonLoader (class in core.serialization) PythonModel (class in core.model) (class in core.plugin.builtin) (class in openalea.core.model) PythonModelController (class in openalea.oalab.paradigm.python) PythonModelGUI (class in openalea.oalab.plugin.builtin.oalab.paradigm)

Q

qCleanupResources() (in module image.gui.icons_rc) QControlContainer (class in openalea.oalab.control.qcontainer) qicon() (in module openalea.oalab.utils) qInitResources() (in module image.gui.icons_rc) QMimeCodec (class in openalea.oalab.mimedata.qcodec) QMimeCodecPlugin (class in openalea.oalab.mimedata.plugin) qt_container() (in module openalea.oalab.service.qt_control) qt_dialog() (in module openalea.oalab.service.qt_control) qt_editor() (in module openalea.oalab.service.qt_control) qt_editor_class() (in module openalea.oalab.service.qt_control) qt_painter() (in module openalea.oalab.service.qt_control)

qt_viewer() (in module openalea.oalab.service.qt_control) qt_widget_plugins() (in module openalea.oalab.service.qt_control) QtControlEditor (class in openalea.oalab.control.editor) qtdecode (image.plugin.oalab.IImageCodecPlugin attribute) (openalea.oalab.mimedata.plugin.QMimeCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinControlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinDataCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinModelCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.UrlCodecPlugin attribute) (openalea.oalab.testing.mimedata.SampleCustomDataCodecPlugin attribute) qtdecode() (openalea.oalab.mimedata.builtin.UrlCodec method) (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.mimedata.qcodec.QMimeCodec method) (openalea.oalab.plugin.oalab.mimedata.IQMimeCodecPlugin method) (openalea.oalab.plugin.oalab.mimedata.IQMimeDecoder method) qtencode (openalea.oalab.mimedata.plugin.QMimeCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinControlCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinDataCodecPlugin attribute) (openalea.oalab.plugin.builtin.oalab.mimedata.BuiltinModelCodecPlugin attribute) (openalea.oalab.testing.mimedata.SampleCustomDataCodecPlugin attribute) qtencode() (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.mimedata.qcodec.QMimeCodec method) (openalea.oalab.plugin.oalab.mimedata.IQMimeEncoder method) query() (in module core.alea) quick_check() (openalea.oalab.mimedata.codec.MimeCodec method) (openalea.oalab.mimedata.manager.MimeCodecManager method) (openalea.oalab.plugin.oalab.mimedata.IQMimeDecoder method) quit() (openalea.visualea.mainwindow.MainWindow method)

R

r2py() (in module openalea.oalab.service.r2py) r_options() (openalea.oalab.model.r.RModel method) rainbow() (in module image.gui.palette) rainbow_blue2green() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_blue2red() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_full() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_green2blue() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_green2red() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_red2blue() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) rainbow_red2green() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) raise_exception (core.node.AbstractNode attribute) random_layout() (in module core.vlab) random_vector_field_like() (in module image.spatial_image) RDVNode (class in core.system.systemnodes) read() (core.data.Data method) (core.settings.Settings method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.shell.shellwidget.ShellWidget method) read_commands() (core.vlab.VlabObject method) read_files() (core.vlab.VlabObject method) (core.vlab.VlabObject2 method) read_hash() (core.path.path method) read_hexhash() (core.path.path method) read_inriheader() (in module image.serial.inrimage) read_inrimage() (in module image.serial.inrimage) read_matrix() (in module image.registration.matrix) read_md5() (core.path.path method) read_sequence() (in module image.serial.basics) read_settings() (openalea.oalab.editor.text_editor.TextEditor method) (openalea.visualea.mainwindow.MainWindow method) read_specification() (core.vlab.VlabObject method) read_tif() (in module image.serial.tif) readline() (openalea.oalab.shell.shell.PyCutExt method) (openalea.oalab.shell.shellwidget.ShellWidget method) readlink() (core.path.path method) readlinkabs() (core.path.path method) readytoclose() (openalea.oalab.plugin.builtin.lab.minilab.MiniLab class method) real_shape (image.spatial_image.SpatialImage attribute) realpath() (core.path.path method) rebuild_category() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) recover_syspath() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) RecursionError redo() (openalea.oalab.editor.text_editor.RichTextEditor method) redo_last_open_menu() (openalea.visualea.mainwindow.MainWindow method) refresh() (openalea.oalab.control.editor.ControlEditor method) (openalea.oalab.control.model_view.ControlModel method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.oalab.project.qtmodel.ProjectModel method) regexp_args() (core.signature.Signature static method) region_extension() (in module image.algo.segmentation) region_labeling() (in module image.algo.segmentation) region_segmentation() (in module image.algo.segmentation) region_segmentation_extension_based() (in module image.algo.segmentation) region_selection() (in module image.algo.segmentation) register() (core.plugin.instance.PluginInstanceManager method) (core.script_library.ScriptLibrary method) (openalea.oalab.service.applet.Applet class method) register_control() (in module core.service.control) register_follower() (core.control.manager.ControlContainer method) register_frames() (in module image_wralea.gui.frame) register_helper() (in module openalea.oalab.service.help) register_history_displayer() (in module openalea.oalab.service.history) register_packages() (core.package.AbstractPackageReader method) (core.package.PyPackageReader method) (core.package.PyPackageReaderVlab method) (openalea.core.package.AbstractPackageReader method) (openalea.core.package.PyPackageReader method) (openalea.core.package.PyPackageReaderVlab method) register_plotter() (in module openalea.oalab.service.plot) register_plugin() (in module core.service.plugin) register_shape3d() (in module openalea.oalab.service.geometry) reinit_treeview() (openalea.oalab.package.widgets.PackageCategorieViewWidget method), [1] (openalea.oalab.package.widgets.PackageViewWidget method), [1] (openalea.visualea.mainwindow.MainWindow method) (openalea.visualea.node_treeview.NodeFactoryView method) release() (core.scene.vplscene.VPLScene method) release_id() (core.graph.id_generator.IdGenerator method) (image.gui.id_generator.IdListGenerator method) (image.gui.id_generator.IdMaxGenerator method) (image.gui.id_generator.IdSetGenerator method) reload() (core.node.AbstractNode method) (core.node.Node method) (core.package.Package method) (core.pkgmanager.PackageManager method) (core.project.configobj.ConfigObj method) (openalea.core.package.Package method) (openalea.core.pkgmanager.PackageManager method) (openalea.oalab.paradigm.creator.ParadigmCreator method) reload_all() (openalea.visualea.mainwindow.MainWindow method) reload_drag_and_drop_plugins() (in module openalea.oalab.service.mimedata) reload_package() (openalea.visualea.node_treeview.NodeFactoryView method) ReloadError relpath() (core.path.path method) relpathto() (core.path.path method) remove() (core.path.path method) (core.project.project.Project method) (core.world.world.World method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) remove_canvas_tab() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) remove_canvas_widget() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) remove_control() (core.control.manager.ControlContainer method) remove_controls() (openalea.oalab.control.model_view.ControlModel method) remove_data() (core.datapool.DataPool method) remove_edge() (core.compositenode.CompositeNode method) (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableEdgeGraph method) (core.graph.interface.graphconcept.MutableEdgeGraphConcept method) (core.graph.property_graph.PropertyGraph method) (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method)

remove_edge_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) remove_edges() (openalea.grapheditor.base.GraphAdapterBase method) remove_element() (openalea.visualea.node_treeview.DataPoolListView method) remove_files() (core.package.Package method) (core.package.UserPackage method) (openalea.core.package.Package method) (openalea.core.package.UserPackage method) remove_from_view() (openalea.grapheditor.interfaces.IGraphViewElement method) remove_image() (image.gui.oalab.applet.ImageStackViewer method) remove_item() (core.project.project.Project method) remove_metadata() (core.metadatadict.MetaDataDict method) remove_node() (core.compositenode.CompositeNode method) (openalea.visualea.node_treeview.NodeFactoryView method) remove_p() (core.path.path method) remove_package() (openalea.visualea.node_treeview.NodeFactoryView method) remove_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) remove_redundant() (in module core.metaclass) remove_scale() (core.graph.interface.latticeconcept.MutableScaleLattice method) remove_tab() (openalea.oalab.paradigm.container.ParadigmContainer method) remove_vertex() (core.dataflow.DataFlow method) (core.graph.graph.Graph method) (core.graph.interface.graph.IMutableVertexGraph method) (core.graph.interface.graphconcept.MutableVertexGraphConcept method) (core.graph.property_graph.PropertyGraph method) (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) remove_vertex_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) remove_vertices() (openalea.grapheditor.base.GraphAdapterBase method) (openalea.grapheditor.interfaces.IGraphAdapter method) remove_world_object() (image.gui.oalab.applet.ImageStackViewer method) removedirs() (core.path.path method) removedirs_p() (core.path.path method) rename() (core.control.control.Control method) (core.data.Data method) (core.path.path method) (core.project.project.Project method) (core.scene.vplscene.VPLScene method) (openalea.oalab.project.projectbrowser.ProjectBrowserView method) rename_item() (core.project.project.Project method) rename_model() (in module openalea.oalab.project.dialog) rename_package() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) RenameModel (class in openalea.oalab.project.dialog) renames() (core.path.path method) reopen_last() (openalea.visualea.mainwindow.MainWindow method) RepeatSectionError replace() (core.funcsigs.Parameter method) (core.funcsigs.Signature method) replace_node() (core.compositenode.CompositeNode method) replace_tab() (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) replace_vertex() (openalea.grapheditor.base.GraphAdapterBase method) replaceall() (openalea.oalab.editor.search.SearchWidget method) repr_code() (core.model.Model method) (core.model.PythonModel method) (openalea.core.model.Model method) (openalea.core.model.PythonModel method) (openalea.oalab.model.parse.InputObj method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) required (image.plugin.oalab.IImageWidgetSelectorPlugin attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginColormapWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginFloatWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntRangeWidgetSelector attribute) (openalea.oalab.plugin.builtin.oalab.control.PluginIntWidgetSelector attribute) resample() (in module image_wralea.interpolation.interpolation) resampling() (in module image.interpolation.interpolation) reset() (core.compositenode.CompositeNode method) (core.control.control.Control method) (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (core.node.AbstractNode method) (core.node.Node method) (core.project.configobj.ConfigObj method) (core.scene.vplscene.VPLScene method) (core.system.systemnodes.Counter method) (core.system.systemnodes.Delay method) (core.system.systemnodes.InitNode method) (core.system.systemnodes.IterNode method) (core.system.systemnodes.PoolDefault method) (core.system.systemnodes.StopSimulation method) (image.gui.oalab.control.IImageViewer method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.control.widget.AbstractQtControlWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) (openalea.oalab_wralea.oalabnode.WorldAdder method) (openalea.oalab_wralea.oalabnode.WorldData method) (openalea.oalab_wralea.oalabnode.WorldDefault method) (openalea.oalab_wralea.oalabnode.WorldWriter method) (openalea.visualea.node_treeview.CategoryModel method) (openalea.visualea.node_treeview.DataPoolModel method) (openalea.visualea.node_treeview.NodeFactoryTreeView method) (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchListView method) resize() (openalea.oalab.manager.selector.ManagerItemSelector method) resizeEvent() (image.gui.pixmap_view.ScalableGraphicsView method) (image.gui.pixmap_view.ScalableLabel method) (openalea.oalab.editor.text_editor.TextEditor method) resolution (image.spatial_image.SpatialImage attribute) resolution() (image.gui.pixmap_view.PixmapView method) (in module image_wralea.spatial_image) retranslateUi() (image.gui.slide_viewer_ui.Ui_MainWindow method) return_annotation (core.funcsigs.Signature attribute) returnEvent() (openalea.oalab.editor.text_editor.TextEditor method) reverse_image() (in module image.algo.basic) RFile (class in openalea.oalab.model.r) (class in openalea.oalab.plugin.builtin.core) rgb() (in module image.pil.ImageQt) RichTextEditor (class in openalea.oalab.editor.text_editor) rkargs() (core.customexception.CustomException method) rmdir() (core.path.path method) rmdir_p() (core.path.path method) RModel (class in openalea.oalab.model.r) (class in openalea.oalab.plugin.builtin.core) RModelController (class in openalea.oalab.paradigm.r) RModelGUI (class in openalea.oalab.plugin.builtin.oalab.paradigm) rmtree() (core.path.path method) rmtree_p() (core.path.path method) root (core.graph.interface.treeconcept.RootedTreeConcept attribute) RootedTreeConcept (class in core.graph.interface.treeconcept) rotate() (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) rotate_left() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) rotate_right() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) rowCount() (openalea.visualea.node_treeview.DataPoolModel method) (openalea.visualea.node_treeview.PkgModel method) (openalea.visualea.node_treeview.SearchModel method) run() (core.model.IModel method) (core.model.Model method) (core.project.project.Project method) (in module core.alea) (openalea.core.model.IModel method) (openalea.core.model.Model method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method) run_and_display() (in module core.alea) run_cell() (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) run_code() (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (core.model.Model method) (openalea.core.model.Model method) run_in_shell() (openalea.oalab.paradigm.container.ParadigmContainer method) run_model() (core.project.project.Project method) runnable() (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method)

S

safe_display_help() (openalea.oalab.paradigm.container.ParadigmContainer method) samefile() (core.path.path method) SampleCustomData (class in openalea.oalab.testing.mimedata) SampleCustomDataCodec (class in openalea.oalab.testing.mimedata) SampleCustomDataCodecPlugin (class in openalea.oalab.testing.mimedata) saturate() (in module image.algo.basic) save() (core.data.Data method) (core.project.project.Project method) (core.project.serialization.ProjectSaver method) (core.serialization.AbstractSaver method) (core.serialization.BGEOMSaver method) (core.serialization.BinarySaver method) (core.serialization.CPickleSaver method) (core.serialization.ISaver method) (core.session.Session method) (in module core.service.serialization) (in module image.serial.basics) (openalea.oalab.paradigm.container.ParadigmContainer method) save_all() (openalea.oalab.paradigm.container.ParadigmContainer method) save_as() (openalea.visualea.mainwindow.MainWindow method) save_controls() (in module core.control.pyserial) (openalea.oalab.control.model_view.ControlView method) save_current() (openalea.oalab.paradigm.container.ParadigmContainer method) save_metadata() (core.project.project.Project method) save_new_src() (core.node.NodeFactory method) save_points() (image.gui.point_selection.PointSelection method) save_project() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) save_session() (openalea.visualea.mainwindow.MainWindow method) ScalableGraphicsView (class in image.gui.pixmap_view) ScalableLabel (class in image.gui.pixmap_view) scale() (core.graph.interface.latticeconcept.MultiscaleContainer method) scale_id() (core.graph.interface.latticeconcept.MutableScaleLattice method) scale_shift_intensities() (in module image.algo.basic) ScaleLattice (class in core.graph.interface.latticeconcept) scales() (core.graph.interface.latticeconcept.ScaleLattice method) Scene (in module core.scene.vplscene) scifloware_actors() (core.algo.dataflow_evaluation.SciFlowareEvaluation method) SciFlowareEvaluation (class in core.algo.dataflow_evaluation) score_packages() (in module core.pm_extend) ScriptLibrary (class in core.script_library) scrollContentsBy() (openalea.oalab.editor.text_editor.TextEditor method) search() (in module core.vlab) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.search.SearchWidget method) (openalea.oalab.editor.text_editor.RichTextEditor method) search_item_request (openalea.oalab.manager.explorer.ManagerExplorerView attribute) search_item_selected() (openalea.oalab.manager.explorer.ManagerExplorerModel method) search_node() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) (openalea.oalab.package.widgets.PackageSearchWidget method), [1] (openalea.visualea.mainwindow.MainWindow method) search_path() (core.project.manager.ProjectManager static method) searchBack() (openalea.oalab.editor.search.SearchWidget method) SearchListView (class in openalea.visualea.node_treeview) SearchModel (class in openalea.visualea.node_treeview) SearchWidget (class in openalea.oalab.editor.search) select_box() (in module image_wralea.gui.select_box_widget) select_default_widgets() (in module openalea.oalab.service.notebook_control) select_manager_item() (in module openalea.oalab.manager.selector) SelectBoxWidget (class in image_wralea.gui.select_box_widget) SelectCategory (class in openalea.oalab.project.dialog) selected_data() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) selected_rect() (image_wralea.gui.select_box_widget.SelectBoxWidget method) selectionChanged() (openalea.oalab.control.model_view.ControlView method) (openalea.oalab.manager.explorer.ManagerExplorerView method) selfAsStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) selfAsStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) sep (core.pkgmanager.PseudoGroup attribute) (openalea.core.pkgmanager.PseudoGroup attribute) serialize() (core.control.serialization.ControlSerializer method) (core.serialization.ISerializer method) (in module core.service.serialization) serialize_controls() (in module core.control.pyserial) Session (class in core.session) set() (core.settings.Settings method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.plugin.oalab.control.IControlWidget method) set_active_project() (in module core.service.project) set_actor() (core.dataflow.DataFlow method) set_all_tab_black() (openalea.oalab.paradigm.container.ParadigmContainer method) set_attribute() (core.world.world.WorldObject method) set_block() (core.node.Node method) set_capacity() (core.graph.interface.port_graph.IPortGraph method) set_caption() (core.node.Node method) set_code() (core.model.IModel method) (core.model.Model method) (core.model.PythonModel method) (openalea.core.model.IModel method) (openalea.core.model.Model method) (openalea.core.model.PythonModel method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) set_compositenode() (core.node.AbstractNode method) set_continuous_eval() (core.compositenode.CompositeNode method) set_control() (openalea.oalab.control.editor.QtControlEditor method) set_criteria() (openalea.oalab.manager.explorer.FilterBox method) (openalea.oalab.manager.explorer.ManagerExplorer method) set_current_frame() (image.gui.animator.FrameAnimator method) set_current_slice() (image.gui.pixmap_view.PixmapStackView method) set_data() (core.node.AbstractNode method) set_default_group_icon() (openalea.oalab.manager.explorer.ManagerExplorerView method) set_default_item_icon() (openalea.oalab.manager.explorer.ManagerExplorerView method) set_default_logger() (core.logger.LoggerOffice method) set_defaults() (core.logger.LoggerOffice method) set_delay() (core.node.Node method) set_editor() (openalea.oalab.editor.search.SearchWidget method) set_factory() (core.node.AbstractNode method) (core.node.Node method) set_filter() (openalea.oalab.manager.explorer.FilterBox method) set_font() (openalea.oalab.editor.text_editor.TextEditor method) set_font_size() (openalea.oalab.editor.text_editor.TextEditor method) set_fps() (image.gui.animator.FrameAnimator method) set_frames() (image.gui.animator.FrameAnimator method) set_func_code() (core.model.IModel method) (core.model.Model method) (openalea.core.model.IModel method) (openalea.core.model.Model method) set_global_handler_level() (core.logger.LoggerOffice method) (in module core.logger) set_global_logger_level() (core.logger.LoggerOffice method) (in module core.logger) set_graph() (openalea.grapheditor.base.GraphAdapterBase method) set_highlighted() (openalea.grapheditor.interfaces.IGraphViewConnectable method) set_icon() (core.package.UserPackage method) (openalea.core.package.UserPackage method) set_id() (core.node.AbstractNode method) (core.node.AbstractPort method) set_image() (image.gui.oalab.applet.ImageStackViewer method) (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image_wralea.image_interface_widget.IImageWidget method) set_input() (core.actor.IActor method) (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeInput method) (core.control.control.Control method) (core.node.Node method) set_input_state() (core.node.Node method) set_interface() (in module openalea.oalab.model.parse) set_io() (core.compositenode.CompositeNode method) (core.node.Node method) set_items() (openalea.oalab.manager.explorer.ManagerExplorer method) (openalea.oalab.manager.explorer.ManagerExplorerModel method) (openalea.oalab.manager.explorer.ManagerExplorerView method) (openalea.oalab.pluginwidget.explorer.PluginExplorer method) set_lazy() (core.node.Node method) set_loop() (image.gui.animator.FrameAnimator method) set_main_win() (openalea.visualea.node_treeview.NodeFactoryView method) set_manager() (core.plugin.instance.PluginInstanceManager method) (openalea.oalab.control.model_view.ControlModel method) set_metadata() (core.metadatadict.MetaDataDict method) set_model() (openalea.oalab.model.visualea.ModelNode method) set_num() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) set_output() (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeOutput method) (core.node.Node method) set_palette() (image.gui.pixmap_view.PixmapStackView method) (image.gui.pixmap_view.PixmapView method) (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) set_pkg() (core.node.AbstractFactory method) set_plugin() (in module core.plugin.functor) set_points() (image.gui.point_selection.PointSelection method) set_port_hidden() (core.node.Node method) set_project() (openalea.oalab.project.projectbrowser.ProjectBrowserView method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) (openalea.oalab.project.qtmodel.ProjectModel method)

set_properties() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) set_provenance() (core.algo.dataflow_evaluation.AbstractEvaluation method) (openalea.visualea.mainwindow.MainWindow method) set_proxy() (core.manager.GenericManager method) set_raise_exception() (core.node.AbstractNode method) set_resolution() (image.gui.pixmap_view.ScalableLabel method) set_results() (openalea.visualea.node_treeview.SearchModel method) set_root() (core.graph.interface.treeconcept.RootedTreeConcept method) set_script() (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) set_slots() (core.metadatadict.MetaDataDict method) set_stack_viewer() (image.gui.slide_viewer_widget.ImageStackViewerPanel method) set_step_code() (core.model.IModel method) (core.model.Model method) (openalea.core.model.IModel method) (openalea.core.model.Model method) set_style() (openalea.oalab.editor.highlight.Highlighter method) set_style_sheet() (openalea.oalab.editor.highlight.Highlighter method) set_sys_wralea_path() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) set_tab_size() (openalea.oalab.editor.text_editor.TextEditor method) set_text() (openalea.grapheditor.interfaces.IGraphViewAnnotation method) (openalea.oalab.editor.plaintext_editor.PlainTextEdit method) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor method) (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) set_title() (image.gui.slide_viewer.SlideViewer method) set_user_application() (core.node.Node method) set_user_wralea_path() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) set_value() (core.control.control.Control method) (core.interface.IInterfaceWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.paradigm.controller.ParadigmController method) set_welcome_actions() (openalea.oalab.paradigm.container.ParadigmContainer method) set_widget_value() (core.interface.IInterfaceWidget method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.python.PythonModelController method) (openalea.oalab.paradigm.textual.TextualModelController method) set_world() (image.gui.oalab.applet.ImageStackViewer method) set_world_object() (image.gui.oalab.applet.ImageStackViewer method) setCompleter() (openalea.oalab.editor.text_editor.TextEditor method) setEditorData() (openalea.oalab.control.model_view.NameControlDelegate method) (openalea.oalab.control.model_view.ValueControlDelegate method) setModelData() (openalea.oalab.control.model_view.NameControlDelegate method) (openalea.oalab.control.model_view.ValueControlDelegate method) setOutputRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) setPixmap() (image.gui.pixmap_view.ScalableLabel method) setText() (openalea.oalab.editor.plaintext_editor.PlainTextEdit method) (openalea.oalab.editor.text_editor.TextEditor method) Settings (class in core.settings) setupUi() (image.gui.slide_viewer_ui.Ui_MainWindow method) setValue() (image.gui.oalab.control.IImageViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.control.widget.AbstractQtControlWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) sgfactory_template (core.compositenode.PyCNFactoryWriter attribute) shell (openalea.oalab.config.gui.MainWindowConfig attribute) shell_command() (in module core.system.systemnodes) shell_priority (openalea.oalab.config.gui.MainWindowConfig attribute) ShellWidget (class in openalea.oalab.plugin.builtin.applet) (class in openalea.oalab.shell.shellwidget) show() (openalea.oalab.plot2d.figurewidget.FigureManagerQT method) (openalea.oalab.plot2d.mplwidget.AbstractMplWidget method) show_active() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) show_inactive() (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) show_plugins() (in module openalea.oalab.pluginwidget.explorer) show_provenance() (openalea.visualea.mainwindow.MainWindow method) show_tab_and_spaces() (openalea.oalab.editor.text_editor.TextEditor method) showEvent() (image_wralea.gui.animator_widget.AnimatorWidget method) showtraceback() (in module core.interpreter.ipython) siblings() (core.graph.interface.treeconcept.RootedTreeConcept method) sign_from_string() (in module core.signature2) sign_inputs() (in module core.signature2) sign_outputs() (in module core.signature2) Signature (class in core.funcsigs) (class in core.signature) signature (core.funcsigs.BoundArguments attribute) signature() (core.codegen.SourceGenerator method) (in module core.funcsigs) silent (core.world.world.WorldObject attribute) SimpleVal (class in core.project.configobj) simulate_destruction_notifications() (core.compositenode.CompositeNode method) simulate_full_data_change() (core.metadatadict.MetaDataDict method) simulate_workspace_addition() (core.session.Session method) Singleton (class in core.singleton) size (core.path.path attribute) size2() (in module image_wralea.image) size3() (in module image_wralea.image) skip_redundant() (in module core.metaclass) skiz() (in module image.algo.morpho) slice_changed() (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) (image_wralea.image_interface_widget.IImageWidget method) SlideViewer (class in image.gui.slide_viewer) snapshot() (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget 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(image_wralea.gui.select_box_widget.SelectBoxWidget attribute) (image_wralea.image_interface_widget.IImageWidget attribute) (openalea.oalab.about.About attribute) (openalea.oalab.about.AboutPage attribute) (openalea.oalab.about.OpenAleaLabCredits attribute) (openalea.oalab.about.OpenAleaLabSummary attribute) (openalea.oalab.control.editor.ControlEditor attribute) (openalea.oalab.control.editor.QtControlEditor attribute) (openalea.oalab.control.manager.ControlManagerWidget attribute) (openalea.oalab.control.model_view.ControlModel attribute) (openalea.oalab.control.model_view.ControlView attribute) (openalea.oalab.control.model_view.NameControlDelegate attribute) (openalea.oalab.control.model_view.ValueControlDelegate attribute) (openalea.oalab.control.qcontainer.QControlContainer attribute) (openalea.oalab.drag_and_drop.DropSelectorMenu attribute) (openalea.oalab.drag_and_drop.DropSelectorWidget attribute) (openalea.oalab.editor.completion.DictionaryCompleter attribute) (openalea.oalab.editor.goto.GoToWidget attribute) (openalea.oalab.editor.highlight.GenericHighlighter attribute) (openalea.oalab.editor.highlight.Highlighter attribute) (openalea.oalab.editor.line_number.Margin attribute) (openalea.oalab.editor.plaintext_editor.PlainTextEdit attribute) (openalea.oalab.editor.plaintext_editor.PlainTextEditor attribute) (openalea.oalab.editor.pyeditor.editor.PyCodeEditor attribute) (openalea.oalab.editor.search.SearchWidget attribute) (openalea.oalab.editor.text_editor.RichTextEditor attribute) (openalea.oalab.editor.text_editor.TextEditor attribute) (openalea.oalab.manager.explorer.FilterBox attribute) (openalea.oalab.manager.explorer.ManagerExplorer attribute) (openalea.oalab.manager.explorer.ManagerExplorerModel attribute) (openalea.oalab.manager.explorer.ManagerExplorerView attribute) (openalea.oalab.manager.selector.ManagerItemSelector attribute) (openalea.oalab.package.treeview.OALabSearchView attribute) (openalea.oalab.package.treeview.OALabTreeView attribute) (openalea.oalab.package.widgets.PackageCategorieViewWidget attribute), [1] (openalea.oalab.package.widgets.PackageManagerTreeView attribute), [1] (openalea.oalab.package.widgets.PackageSearchWidget attribute), [1] (openalea.oalab.package.widgets.PackageViewWidget attribute), [1] (openalea.oalab.paradigm.container.ModelEditorApplet attribute) (openalea.oalab.paradigm.container.ParadigmContainer attribute) (openalea.oalab.paradigm.creator.ParadigmCreator attribute) (openalea.oalab.paradigm.creator.ParadigmInfoSelector attribute) (openalea.oalab.plot2d.figurewidget.MplCanvas attribute) (openalea.oalab.plot2d.figurewidget.MplFigureWidget attribute) (openalea.oalab.plot2d.mplwidget.AbstractMplWidget attribute) (openalea.oalab.plot2d.mplwidget.CanvasWidget attribute) (openalea.oalab.plot2d.mplwidget.MplTabWidget attribute) (openalea.oalab.pluginwidget.explorer.PluginExplorer attribute) (openalea.oalab.pluginwidget.explorer.Preview attribute) (openalea.oalab.project.creator.CreateProjectWidget attribute) (openalea.oalab.project.dialog.RenameModel attribute) (openalea.oalab.project.dialog.SelectCategory attribute) (openalea.oalab.project.explorer.ProjectExplorer attribute) (openalea.oalab.project.preview.Preview attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserView attribute) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget attribute) (openalea.oalab.project.projecteditor.ProjectEditorView attribute) (openalea.oalab.project.projecteditor.ProjectEditorWidget attribute) (openalea.oalab.project.qtmodel.ProjectModel attribute) (openalea.oalab.shell.shell.PyCutExt attribute) (openalea.oalab.shell.shellwidget.ShellWidget attribute) (openalea.oalab.testing.applet.TestApplet attribute) (openalea.oalab.testing.applet.TestMainWin attribute) (openalea.oalab.testing.applet.TestNApplets attribute) (openalea.oalab.testing.applet.TestTwoApplets attribute) (openalea.oalab.testing.drag_and_drop.DragAndDropWidget attribute) (openalea.oalab.testing.drag_and_drop.DragModel attribute) (openalea.oalab.testing.drag_and_drop.DragWidget attribute) (openalea.oalab.testing.drag_and_drop.DropWidget attribute) (openalea.visualea.mainwindow.MainWindow attribute) (openalea.visualea.node_treeview.CategoryModel attribute) (openalea.visualea.node_treeview.DataPoolListView attribute) (openalea.visualea.node_treeview.DataPoolModel attribute) (openalea.visualea.node_treeview.NodeFactoryTreeView attribute) (openalea.visualea.node_treeview.PkgModel attribute) (openalea.visualea.node_treeview.SearchListView attribute) (openalea.visualea.node_treeview.SearchModel attribute) statusBar() (openalea.oalab.plot2d.mplwidget.AbstractMplWidget method) statvfs() (core.path.path method) step() (core.model.IModel method) (core.model.Model method) (image.gui.animator.FrameAnimator method) (openalea.core.model.IModel method) (openalea.core.model.Model method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method) step_code (core.model.Model attribute) (openalea.core.model.Model attribute) stop() (core.model.IModel method) (core.project.project.Project method) (image.gui.animator.FrameAnimator method) (openalea.core.model.IModel method) (openalea.oalab.model.r.RModel method) (openalea.oalab.model.textual.TextualModel method) (openalea.oalab.model.visualea.VisualeaModel method) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.container.ParadigmContainer method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.textual.TextualModelController method) (openalea.oalab.plugin.builtin.lab.fulllab.FullLab class method) (openalea.oalab.plugin.builtin.lab.minilab.MiniLab class method) StopSimulation (class in core.system.systemnodes) Store (class in openalea.oalab.plugin.builtin.applet) store (openalea.oalab.config.gui.MainWindowConfig attribute) store_view_data() (openalea.grapheditor.interfaces.IGraphViewElement method) stripext() (core.path.path method) stroke() (in module image.algo.basic) structural_copy() (in module core.algo.dataflow_copy) sub_tree() (core.graph.interface.treeconcept.EditableTreeConcept method) SubDataflow (class in core.dataflow) symlink() (core.path.path method) (in module openalea.oalab.project.symlink) sync() (core.world.world.World method) (openalea.oalab.paradigm.IModelController method) syntax_stack (openalea.oalab.editor.highlight.PygmentsBlockUserData attribute) SyntaxColor (class in openalea.oalab.shell.shell) sysAsStdErrRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) sysAsStdOutRedirection() (openalea.oalab.shell.streamredirection.GraphicalStreamRedirection method) system_cmd() (in module core.system.systemnodes)

T

tabCloseEvent() (openalea.oalab.plot2d.mplwidget.MplTabWidget method) target() (core.graph.graph.Graph method) (core.graph.interface.graph.IGraph method) (core.graph.interface.graphconcept.GraphConcept method) target_port() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) test1() (in module core.vlab) test_applet() (in module openalea.oalab.testing.applet) TestApplet (class in openalea.oalab.testing.applet) TestCase (class in core.unittest_tools) TestMainWin (class in openalea.oalab.testing.applet) TestNApplets (class in openalea.oalab.testing.applet) TestTwoApplets (class in openalea.oalab.testing.applet) text (core.vlab.VlabObject attribute) text() (core.path.path method) textChanged (openalea.oalab.editor.text_editor.RichTextEditor attribute) TextEditor (class in openalea.oalab.editor.text_editor) TextualModel (class in openalea.oalab.model.textual) TextualModelController (class in openalea.oalab.paradigm.textual) TextualModelGUI (class in openalea.oalab.plugin.builtin.oalab.paradigm) textUnderCursor() (openalea.oalab.editor.text_editor.TextEditor method) ThreadedRedirection (class in openalea.oalab.shell.streamredirection) ThreadManager (class in core.threadmanager)

title (core.customexception.CustomException attribute) (core.project.project.ErrorItemExistsInProject attribute) (image.plugin.algo.IImageFilteringPlugin attribute) (openalea.oalab.mimedata.exception.MimeConversionError attribute) to_factory() (core.compositenode.CompositeNode method) to_image() (in module image.gui.slide_viewer_widget) to_img() (in module image.gui.pixmap) to_img_fast() (in module image.gui.pixmap) to_pix() (in module image.gui.pixmap) to_python_script() (openalea.visualea.mainwindow.MainWindow method) to_script() (core.compositenode.CompositeNode method) (core.compositenode.CompositeNodeInput method) (core.compositenode.CompositeNodeOutput method) (core.data.DataNode method) (core.node.Annotation method) (core.node.Node method) to_shape3d() (in module openalea.oalab.service.geometry) to_source() (in module core.codegen) to_tex() (in module image.gui.pixmap) toggle_running() (image.gui.animator.FrameAnimator method) toolbar_actions() (openalea.oalab.paradigm.container.ModelEditorApplet method) (openalea.oalab.plot2d.figurewidget.MplFigureWidget method) (openalea.oalab.plot2d.mplwidget.MplTabWidget method) (openalea.oalab.plugin.applet.IApplet method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) toolbars() (openalea.oalab.paradigm.container.ModelEditorApplet method) (openalea.oalab.plugin.applet.IApplet method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) (openalea.oalab.project.projecteditor.ProjectEditorWidget method) ToScriptEvaluation (class in core.algo.dataflow_evaluation) touch() (core.path.path method) traverse_tree() (in module core.graph.interface.treeconcept) Tutorial (class in openalea.oalab.plugin.builtin.oalab.project) TypeInterfaceMap (class in core.interface) TypeNameInterfaceMap (class in core.interface)

U

Ui_MainWindow (class in image.gui.slide_viewer_ui) uid() (in module core.pm_extend) UNCHANGED (core.plugin.plugin.PluginDef attribute) uncomment() (openalea.oalab.editor.text_editor.RichTextEditor method) (openalea.oalab.editor.text_editor.TextEditor method) uncshare (core.path.path attribute) undo() (openalea.oalab.editor.text_editor.RichTextEditor method) uninstall() (in module oalab_postinstall) UnknowFileType, [1] UnknownItemError UnknownNodeError, [1] UnknownPackageError, [1] UnknownType unlink() (core.path.path method) unlink_p() (core.path.path method) unregister() (core.plugin.instance.PluginInstanceManager method) unregister_control() (in module core.service.control) unregister_follower() (core.control.manager.ControlContainer method) UnreprError unvalidate() (core.interface.IInterfaceWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) unvalidate_input() (core.node.Node method) update() (core.control.manager.ControlContainer method) (core.interpreter.ipython.IPythonInProcessInterpreter method) (core.interpreter.python.Interpreter method) (core.metadatadict.MetaDataDict method) (core.project.serialization.ProjectLoader method) (core.scene.vplscene.VPLScene method) (core.serialization.AbstractDeserializer method) (core.serialization.AbstractLoader method) (core.serialization.IDeserializer method) (core.serialization.ILoader method) update_category() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method)

update_dict() (openalea.oalab.editor.completion.DictionaryCompleter method) update_eval_listeners() (core.compositenode.CompositeNode method) update_factory() (core.package.Package method) (openalea.core.package.Package method) update_line_destination() (openalea.grapheditor.interfaces.IGraphViewEdge method) update_line_source() (openalea.grapheditor.interfaces.IGraphViewEdge method) update_namespace() (core.project.manager.ProjectManager method) (core.world.world.World method) update_pix() (image.gui.animator.FrameAnimator method) (image.gui.point_selection.PointSelection method) (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) update_points() (image.gui.point_selection.PointSelection method) update_state() (core.interface.IInterfaceWidget method) update_tabwidget() (openalea.visualea.mainwindow.MainWindow method) update_world_object() (image.gui.oalab.applet.ImageStackViewer method) updateEditorGeometry() (openalea.oalab.control.model_view.ValueControlDelegate method) UrlCodec (class in openalea.oalab.mimedata.builtin) UrlCodecPlugin (class in openalea.oalab.plugin.builtin.oalab.mimedata) user_application (core.node.Node attribute) user_ns (core.interpreter.python.Interpreter attribute) UserException UserPackage (class in core.package) (class in openalea.core.package) using_module() (core.path.path class method) USR_PKG_NAME (core.session.Session attribute) utime() (core.path.path method)

V

valid_array() (image.spatial_image.SpatialImage class method) valid_item_name() (core.project.project.Project method) validate() (core.project.configobj.ConfigObj method) validity_changed (openalea.oalab.paradigm.creator.ParadigmInfoSelector attribute) value (core.control.control.Control attribute) value() (image.gui.oalab.control.IImageViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) (openalea.oalab.control.widget.AbstractControlWidget method) (openalea.oalab.control.widget.AbstractQtControlWidget method) (openalea.oalab.control.widget.OpenAleaControlWidget method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.plugin.oalab.control.IControlWidget method) (openalea.oalab.service.notebook_control.NotebookControlWidget method) valueChanged (image.gui.slide_viewer_widget.ImageStackViewerWidget attribute) ValueControlDelegate (class in openalea.oalab.control.model_view) values() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) VAR_KEYWORD (core.funcsigs.Parameter attribute) VAR_POSITIONAL (core.funcsigs.Parameter attribute) vertex() (core.dataflow.DataFlow method) (core.graph.interface.port_graph.IPortGraph method) vertex_added() (openalea.grapheditor.interfaces.IGraphListener method) vertex_id() (core.graph.interface.graphconcept.MutableVertexGraphConcept method) vertex_property() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) vertex_property_names() (core.graph.interface.property_graph.IPropertyGraph method) (core.graph.property_graph.PropertyGraph method) vertex_removed() (openalea.grapheditor.interfaces.IGraphListener method) VertexListGraphConcept (class in core.graph.interface.graphconcept) vertices() (core.graph.graph.Graph method) (core.graph.interface.graph.IVertexListGraph method) (core.graph.interface.graphconcept.VertexListGraphConcept method) View (class in core.traitsui) view mode, [1] view() (openalea.oalab.plugin.oalab.control.IWidgetSelector class method) view_shape (openalea.oalab.plugin.oalab.control.ControlWidgetSelectorPlugin attribute) viewer3d (openalea.oalab.config.gui.MainWindowConfig attribute) viewer_count (image.gui.slide_viewer.SlideViewer attribute) visit_alias() (core.codegen.SourceGenerator method) visit_arguments() (core.codegen.SourceGenerator method) visit_Assert() (core.codegen.SourceGenerator method) visit_Assign() (core.codegen.SourceGenerator method) visit_Attribute() (core.codegen.SourceGenerator method) visit_AugAssign() (core.codegen.SourceGenerator method) visit_BinOp() (core.codegen.SourceGenerator method) visit_BoolOp() (core.codegen.SourceGenerator method) visit_Break() (core.codegen.SourceGenerator method) visit_Bytes() (core.codegen.SourceGenerator method) visit_Call() (core.codegen.SourceGenerator method) visit_ClassDef() (core.codegen.SourceGenerator method) visit_Compare() (core.codegen.SourceGenerator method) visit_comprehension() (core.codegen.SourceGenerator method) visit_Continue() (core.codegen.SourceGenerator method) visit_Delete() (core.codegen.SourceGenerator method) visit_Dict() (core.codegen.SourceGenerator method) visit_DictComp() (core.codegen.SourceGenerator method) visit_Ellipsis() (core.codegen.SourceGenerator method) visit_excepthandler() (core.codegen.SourceGenerator method)

visit_Expr() (core.codegen.SourceGenerator method) visit_ExtSlice() (core.codegen.SourceGenerator method) visit_For() (core.codegen.SourceGenerator method) visit_FunctionDef() (core.codegen.SourceGenerator method) visit_GeneratorExp() (core.codegen.SourceGenerator method) visit_Global() (core.codegen.SourceGenerator method) visit_If() (core.codegen.SourceGenerator method) visit_IfExp() (core.codegen.SourceGenerator method) visit_Import() (core.codegen.SourceGenerator method) visit_ImportFrom() (core.codegen.SourceGenerator method) visit_Lambda() (core.codegen.SourceGenerator method) visit_List() (core.codegen.SourceGenerator method) visit_ListComp() (core.codegen.SourceGenerator method) visit_Name() (core.codegen.SourceGenerator method) visit_Nonlocal() (core.codegen.SourceGenerator method) visit_Num() (core.codegen.SourceGenerator method) visit_Pass() (core.codegen.SourceGenerator method) visit_Print() (core.codegen.SourceGenerator method) visit_Raise() (core.codegen.SourceGenerator method) visit_Repr() (core.codegen.SourceGenerator method) visit_Return() (core.codegen.SourceGenerator method) visit_Set() (core.codegen.SourceGenerator method) visit_SetComp() (core.codegen.SourceGenerator method) visit_Slice() (core.codegen.SourceGenerator method) visit_Starred() (core.codegen.SourceGenerator method) visit_Str() (core.codegen.SourceGenerator method) visit_Subscript() (core.codegen.SourceGenerator method) visit_TryExcept() (core.codegen.SourceGenerator method) visit_TryFinally() (core.codegen.SourceGenerator method) visit_Tuple() (core.codegen.SourceGenerator method) visit_UnaryOp() (core.codegen.SourceGenerator method) visit_While() (core.codegen.SourceGenerator method) visit_With() (core.codegen.SourceGenerator method) visit_Yield() (core.codegen.SourceGenerator method) Visitor (class in core.graph.interface.treeconcept) VisualeaFile (class in openalea.oalab.model.visualea) (class in openalea.oalab.plugin.builtin.core) VisualeaModel (class in openalea.oalab.model.visualea) (class in openalea.oalab.plugin.builtin.core) VisualeaModelController (class in openalea.oalab.paradigm.visualea) VisualeaModelGUI (class in openalea.oalab.plugin.builtin.oalab.paradigm) vlab_object() (in module core.vlab) VlabFile (class in core.vlab) VlabObject (class in core.vlab) VlabObject2 (class in core.vlab) VPLScene (class in core.scene.vplscene)

W

walk() (core.path.path method) walkdirs() (core.path.path method) walkfiles() (core.path.path method) warn_deprecated() (in module core.util) warning() (in module core.logger) web() (openalea.visualea.mainwindow.MainWindow method) wheelEvent() (image.gui.slide_viewer.SlideViewer method) (image.gui.slide_viewer_widget.ImageStackViewerWidget method) while_multi2() (in module core.system.systemnodes) WhileMultiVar (class in core.system.systemnodes) WhileUniVar (class in core.system.systemnodes) white_and_black() (in module image.gui.colormaps) (in module openalea.oalab.colormap.colormaps) who_use() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) widget() (in module openalea.oalab.service.qt_control) (openalea.oalab.paradigm.IModelController method) (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) widget_label() (in module openalea.oalab.control.editor) widget_value() (openalea.oalab.paradigm.controller.ParadigmController method) (openalea.oalab.paradigm.python.PythonModelController method) (openalea.oalab.paradigm.textual.TextualModelController method) (openalea.oalab.paradigm.visualea.VisualeaModelController method) worker() (in module core.threadmanager) workflow_exec() (core.algo.dataflow_evaluation.PrintProvenance method) (core.algo.dataflow_evaluation.Provenance method) World (class in core.world.world) (class in openalea.oalab.plugin.builtin.applet) WorldAdder (class in openalea.oalab_wralea.oalabnode) WorldControl (class in openalea.oalab.plugin.builtin.applet) WorldData (class in openalea.oalab_wralea.oalabnode) WorldDefault (class in openalea.oalab_wralea.oalabnode) WorldObject (class in core.world.world) WorldReader (class in openalea.oalab_wralea.oalabnode)

WorldWriter (class in openalea.oalab_wralea.oalabnode) wra_bw() (in module image_wralea.palette) wra_grayscale() (in module image_wralea.palette) wra_imread() (in module image_wralea.serial.serial) wra_imsave() (in module image_wralea.serial.serial) wra_load() (in module image_wralea.serial.serial) wra_rotate() (in module image_wralea.interpolation.interpolation) wra_save() (in module image_wralea.serial.serial) wra_shift() (in module image_wralea.interpolation.interpolation) wra_zoom() (in module image_wralea.interpolation.interpolation) wralea_template (core.package.PyPackageWriter attribute) (openalea.core.package.PyPackageWriter attribute) write() (core.algo.dataflow_evaluation.Provenance method) (core.codegen.SourceGenerator method) (core.package.UserPackage method) (core.project.configobj.ConfigObj method) (core.settings.Settings method) (openalea.core.package.UserPackage method) (openalea.oalab.shell.shell.PyCutExt method) (openalea.oalab.shell.shellwidget.ShellWidget method) (openalea.oalab.shell.streamredirection.MultipleRedirection method) (openalea.oalab.shell.streamredirection.NoneOutput method) (openalea.oalab.shell.streamredirection.ThreadedRedirection method) write_bytes() (core.path.path method) write_config() (core.pkgmanager.PackageManager method) (openalea.core.pkgmanager.PackageManager method) write_inrimage() (in module image.serial.inrimage) write_lines() (core.path.path method) write_settings() (core.project.manager.ProjectManager method) (openalea.oalab.editor.text_editor.TextEditor method) (openalea.oalab.project.projectbrowser.ProjectBrowserWidget method) (openalea.visualea.mainwindow.MainWindow method) write_text() (core.path.path method) write_tif() (in module image.serial.tif) write_wralea() (core.package.PyPackageWriter method) (openalea.core.package.PyPackageWriter method) writelines() (openalea.oalab.shell.shell.PyCutExt method) ws (core.session.Session attribute) ws_changed() (openalea.visualea.mainwindow.MainWindow method)